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Carl R. Woese Institute for Genomic Biology

Where Science Meets Society

Research Areas

Jhong, H. R. M., Tornow, C. E., Smid, B., Gewirth, A. A., Lyth, S. M., & Kenis, P. J. A. (2016). A Nitrogen-Doped Carbon Catalyst for Electrochemical CO2 Conversion to CO with High Selectivity and Current Density. ChemSusChem. DOI: 10.1002/cssc.201600843
 
Clay, N. E., Shin, K., Ozcelikkale, A., Lee, M. K., Rich, M. H., Kim, D. H., ... Kong, H. (2016). Modulation of Matrix Softness and Interstitial Flow for 3D Cell Culture Using a Cell-Microenvironment-on-a-Chip System. ACS Biomaterial Science and Engineering, 2(11), 1968-1975. DOI: 10.1021/acsbiomaterials.6b00379
 
Vega, J. C. M. L., Lee, M. K., Qin, E. C., Rich, M., Lee, K. Y., Kim, D. H., ... Kong, H. (2016). Three dimensional conjugation of recombinant N-cadherin to a hydrogel for: In vitro anisotropic neural growth. Journal of Materials Chemistry B, 4(42), 6803-6811. DOI: 10.1039/c6tb01814a
 
Alexandri, P., Megens, H. J., Crooijmans, R. P. M. A., Groenen, M. A. M., Goedbloed, D. J., Herrero-Medrano, J. M., ... Triantafyllidis, A. (2016). Distinguishing migration events of different timing for wild boar in the Balkans. Journal of Biogeography. DOI: 10.1111/jbi.12861
 
Karimi, P., Ostoja-Starzewski, M., & Jasiuk, I. (2016). Experimental and computational study of shielding effectiveness of polycarbonate carbon nanocomposites. Journal of Applied Physics, 120(14), [145103]. DOI: 10.1063/1.4964691
 
Maeki, M., Yamazaki, S., Pawate, A. S., Ishida, A., Tani, H., Yamashita, K., ... Miyazaki, M. (2016). A microfluidic-based protein crystallization method in 10 micrometer-sized crystallization space. CrystEngComm, 18(40), 7722-7727. DOI: 10.1039/c6ce01671e
 
Schook, L. B., Rund, L., Begnini, K. R., Remião, M. H., Seixas, F. K., & Collares, T. (2016). Emerging technologies to create inducible and genetically defined porcine cancer models. Frontiers in Genetics, 7(FEB), [28]. DOI: 10.3389/fgene.2016.00028
 
Iacolina, L., Scandura, M., Goedbloed, D. J., Alexandri, P., Crooijmans, R. P. M. A., Larson, G., ... Megens, H. J. (2016). Genomic diversity and differentiation of a managed island wild boar population. Heredity, 116(1), 60-67. DOI: 10.1038/hdy.2015.70
 
Bakir, M., Meyer, J. L., Economy, J., & Jasiuk, I. (2016). Heat-Induced Polycondensation Reaction with Self-Generated Blowing Agent Forming Aromatic Thermosetting Copolyester Foams. Macromolecules, 49(17), 6489-6496. DOI: 10.1021/acs.macromol.6b00971
 
Wei, J., McFarlin, B. L., & Wagoner Johnson, A. J. (2016). A multi-indent approach to detect the surface of soft materials during nanoindentation. Journal of Materials Research, 31(17), 2672-2685. DOI: 10.1557/jmr.2016.265
 
Cook, M. D., Allen, J. M., Pence, B. D., Wallig, M. A., Gaskins, H. R., White, B. A., & Woods, J. A. (2016). Exercise and gut immune function: Evidence of alterations in colon immune cell homeostasis and microbiome characteristics with exercise training. Immunology and Cell Biology, 94(2), 158-163. DOI: 10.1038/icb.2015.108
 
Verma, S., Kim, B., Jhong, H. R. M., Ma, S., & Kenis, P. J. A. (2016). A Gross-Margin Model for Defining Technoeconomic Benchmarks in the Electroreduction of CO2ChemSusChem, 1972-1979. DOI: 10.1002/cssc.201600394
 
Kale, S., Sabet, F. A., Jasiuk, I., & Ostoja-Starzewski, M. (2016). Effect of filler alignment on percolation in polymer nanocomposites using tunneling-percolation model. Journal of Applied Physics, 120(4), [045105]. DOI: 10.1063/1.4959610
 
Li, X., Anderson, P., Jhong, H. R. M., Paster, M., Stubbins, J. F., & Kenis, P. J. A. (2016). Greenhouse Gas Emissions, Energy Efficiency, and Cost of Synthetic Fuel Production Using Electrochemical CO2 Conversion and the Fischer-Tropsch Process. Energy and Fuels, 30(7), 5980-5989. DOI: 10.1021/acs.energyfuels.6b00665
 
Ren, X., Weisgerber, D. W., Bischoff, D., Lewis, M. S., Reid, R. R., He, T. C., ... Lee, J. C. (2016). Nanoparticulate Mineralized Collagen Scaffolds and BMP-9 Induce a Long-Term Bone Cartilage Construct in Human Mesenchymal Stem Cells. Advanced healthcare materials, 5(14), 1821-1830. DOI: 10.1002/adhm.201600187
 
Schmidt, J., Lee, M. K., Ko, E., Jeong, J. H., Dipietro, L. A., & Kong, H. (2016). Alginate sulfates mitigate binding kinetics of proangiogenic growth factors with receptors toward revascularization. Molecular Pharmaceutics, 13(7), 2148-2154. DOI: 10.1021/acs.molpharmaceut.5b00905
 
Idkaidek, A., & Jasiuk, I. (2016). Cortical bone fracture analysis using XFEM - case study. International Journal for Numerical Methods in Biomedical Engineering. DOI: 10.1002/cnm.2809
 
Jaim, H. M. I., Isaacs, R. A., Rashkeev, S. N., Kuklja, M., Cole, D. P., LeMieux, M. C., ... Salamanca-Riba, L. G. (2016). Sp2 carbon embedded in Al-6061 and Al-7075 alloys in the form of crystalline graphene nanoribbons. Carbon, 107, 56-66. DOI: 10.1016/j.carbon.2016.05.053
 
Griffon, D. J., Cho, J., Wagner, J. R., Charavaryamath, C., Wei, J., & Wagoner Johnson, A. (2016). Effects of Hypoxia and Chitosan on Equine Umbilical Cord-Derived Mesenchymal Stem Cells. Stem Cells International, 2016, [2987140]. DOI: 10.1155/2016/2987140
 
Wolf, P. G., Biswas, A., Morales, S. E., Greening, C., & Gaskins, H. R. (2016). H2 metabolism is widespread and diverse among human colonic microbes. Gut Microbes, 7(3), 235-245. DOI: 10.1080/19490976.2016.1182288
 
Jeffries, J. L., Jia, J., Choi, W., Choe, S., Miao, J., Xu, Y., ... Lau, G. W. (2016). Pseudomonas aeruginosa pyocyanin modulates mucin glycosylation with sialyl-Lewis x to increase binding to airway epithelial cells. Mucosal Immunology, 9(4), 1039-1050. DOI: 10.1038/mi.2015.119
 
Ma, S., Luo, R., Gold, J. I., Yu, A. Z., Kim, B., & Kenis, P. J. A. (2016). Carbon nanotube containing Ag catalyst layers for efficient and selective reduction of carbon dioxide. Journal of Materials Chemistry A, 4(22), 8573-8578. DOI: 10.1039/c6ta00427j
 
Dan, A., Huang, R. B., & Leckband, D. E. (2016). Dynamic Imaging Reveals Coordinate Effects of Cyclic Stretch and Substrate Stiffness on Endothelial Integrity. Annals of Biomedical Engineering, 44(12), 3655-3667. DOI: 10.1007/s10439-016-1677-4
 
Ridlon, J. M., Wolf, P. G., & Gaskins, H. R. (2016). Taurocholic acid metabolism by gut microbes and colon cancer. Gut Microbes, 7(3), 201-215. DOI: 10.1080/19490976.2016.1150414
 
Raman, R., Clay, N. E., Sen, S., Melhem, M., Qin, E., Kong, H., & Bashir, R. (2016). 3D printing enables separation of orthogonal functions within a hydrogel particle. Biomedical Microdevices, 18(3), [49]. DOI: 10.1007/s10544-016-0068-9
 
Ji, P., Schachtschneider, K. M., Schook, L. B., Walker, F. R., & Johnson, R. W. (2016). Peripheral viral infection induced microglial sensome genes and enhanced microglial cell activity in the hippocampus of neonatal piglets. Brain, Behavior, and Immunity, 54, 243-251. DOI: 10.1016/j.bbi.2016.02.010
 
Muhamed, I., Wu, J., Sehgal, P., Kong, X., Tajik, A., Wang, N., & Leckband, D. E. (2016). E-cadherin-mediated force transduction signals regulate global cell mechanics. Journal of Cell Science, 129(9), 1843-1854. DOI: 10.1242/jcs.185447
 
Hortensius, R. A., Ebens, J. H., & Harley, B. A. C. (2016). Immunomodulatory effects of amniotic membrane matrix incorporated into collagen scaffolds. Journal of Biomedical Materials Research - Part A. DOI: 10.1002/jbm.a.35663
 
O’Connor, D. T., Elkhodary, K. I., Fouad, Y., Greene, M. S., Sabet, F. A., Qian, J., ... Jasiuk, I. (2016). Modeling orthotropic elasticity, localized plasticity and fracture in trabecular bone. Computational Mechanics, 58(3), 423-439. DOI: 10.1007/s00466-016-1301-3
 
See, G. G., Naughton, M. S., Xu, L., Nuzzo, R. G., Kenis, P. J. A., & Cunningham, B. T. (2016). Enhanced emission of quantum dots embedded within the high-index dielectric regions of photonic crystal slabs. Applied Physics Letters, 108(17), [171108]. DOI: 10.1063/1.4948379
 
Monzani, P. S., Adona, P. R., Ohashi, O. M., Meirelles, F. V., & Wheeler, M. B. (2016). Transgenic bovine as bioreactors: Challenges and perspectives. Bioengineered Bugs, 1-9. DOI: 10.1080/21655979.2016.1171429
 
Wright, B. D., Whittenberg, J., Desai, A., DiFelice, C., Kenis, P. J. A., Lapi, S. E., & Reichert, D. E. (2016). Microfluidic preparation of a 89Zr-Labeled trastuzumab single-patient dose. Journal of Nuclear Medicine, 57(5), 747-752. DOI: 10.2967/jnumed.115.166140
 
Baró, J., Shyu, P., Pang, S., Jasiuk, I. M., Vives, E., Salje, E. K. H., & Planes, A. (2016). Avalanche criticality during compression of porcine cortical bone of different ages. Physical Review E - Statistical, Nonlinear, and Soft Matter Physics, 93(5), [053001]. DOI: 10.1103/PhysRevE.93.053001
 
Abueidda, D. W., Abu Al-Rub, R. K., Dalaq, A. S., Lee, D. W., Khan, K. A., & Jasiuk, I. (2016). Effective conductivities and elastic moduli of novel foams with triply periodic minimal surfaces. Mechanics of Materials, 95, 102-115. DOI: 10.1016/j.mechmat.2016.01.004
 
Darfour-Oduro, K. A., Megens, H. J., Roca, A. L., Groenen, M. A. M., & Schook, L. B. (2016). Evolutionary patterns of Toll-like receptor signaling pathway genes in the Suidae. BMC Evolutionary Biology, 16(1), [602]. DOI: 10.1186/s12862-016-0602-7
 
Darfour-Oduro, K. A., Megens, H. J., Roca, A., Groenen, M. A. M., & Schook, L. B. (2016). Evidence for adaptation of porcine Toll-like receptors. Immunogenetics, 68(3), 179-189. DOI: 10.1007/s00251-015-0892-8
 
Durgam, S. S., Stewart, A. A., Sivaguru, M., Wagoner Johnson, A. J., & Stewart, M. C. (2016). Tendon-derived progenitor cells improve healing of collagenase-induced flexor tendinitis. Journal of Orthopaedic Research. DOI: 10.1002/jor.23251
 
Weisgerber, D. W., Erning, K., Flanagan, C. L., Hollister, S. J., & Harley, B. A. C. (2016). Evaluation of multi-scale mineralized collagen-polycaprolactone composites for bone tissue engineering. Journal of the Mechanical Behavior of Biomedical Materials, 61, 318-327. DOI: 10.1016/j.jmbbm.2016.03.032
 
Parthasarathy, G., Chen, J., Chen, X., Chia, N., O'Connor, H. M., Wolf, P. G., ... Bharucha, A. E. (2016). Relationship between Microbiota of the Colonic Mucosa vs Feces and Symptoms, Colonic Transit, and Methane Production in Female Patients with Chronic Constipation. Gastroenterology, 150(2), 367-379e1. DOI: 10.1053/j.gastro.2015.10.005
 
Baldwin, J., Collins, B., Wolf, P. G., Martinez, K., Shen, W., Chuang, C. C., ... McIntosh, M. K. (2016). Table grape consumption reduces adiposity and markers of hepatic lipogenesis and alters gut microbiota in butter fat-fed mice. Journal of Nutritional Biochemistry, 27, 123-135. DOI: 10.1016/j.jnutbio.2015.08.027
 
Ren, X., Tu, V., Bischoff, D., Weisgerber, D. W., Lewis, M. S., Yamaguchi, D. T., ... Lee, J. C. (2016). Nanoparticulate mineralized collagen scaffolds induce in vivo bone regeneration independent of progenitor cell loading or exogenous growth factor stimulation. Biomaterials, 89, 67-78. DOI: 10.1016/j.biomaterials.2016.02.020
 
Shashikanth, N., Kisting, M. A., & Leckband, D. E. (2016). Kinetic Measurements Reveal Enhanced Protein-Protein Interactions at Intercellular Junctions. Scientific Reports, 6, [23623]. DOI: 10.1038/srep23623
 
Lee, M. K., Park, J., Wang, X., Roein-Peikar, M., Ko, E., Qin, E., ... Kong, H. (2016). Rupture force of cell adhesion ligand tethers modulates biological activities of a cell-laden hydrogel. Chemical Communications, 52(26), 4757-4760. DOI: 10.1039/c6cc00036c
 
Gomez, A., Petrzelkova, K. J., Burns, M. B., Yeoman, C. J., Amato, K. R., Vlckova, K., ... Blekhman, R. (2016). Gut Microbiome of Coexisting BaAka Pygmies and Bantu Reflects Gradients of Traditional Subsistence Patterns. Cell Reports, 14(9), 2142-2153. DOI: 10.1016/j.celrep.2016.02.013
 
Verma, S., Lu, X., Ma, S., Masel, R. I., & Kenis, P. J. A. (2016). The effect of electrolyte composition on the electroreduction of CO2 to CO on Ag based gas diffusion electrodes. Physical Chemistry Chemical Physics, 18(10), 7075-7084. DOI: 10.1039/c5cp05665a
 
Raman, R., Bhaduri, B., Mir, M., Shkumatov, A., Lee, M. K., Popescu, G., ... Bashir, R. (2016). High-Resolution Projection Microstereolithography for Patterning of Neovasculature. Advanced healthcare materials, 5(5), 610-619. DOI: 10.1002/adhm.201500721
 
Kim, B., Hillman, F., Ariyoshi, M., Fujikawa, S., & Kenis, P. J. A. (2016). Effects of composition of the micro porous layer and the substrate on performance in the electrochemical reduction of CO2 to CO. Journal of Power Sources, 312, 192-198. DOI: 10.1016/j.jpowsour.2016.02.043
 
Mozdzen, L. C., Rodgers, R., Banks, J. M., Bailey, R. C., & Harley, B. A. C. (2016). Increasing the strength and bioactivity of collagen scaffolds using customizable arrays of 3D-printed polymer fibers. Acta Biomaterialia, 33, 25-33. DOI: 10.1016/j.actbio.2016.02.004
 
Dalaq, A. S., Abueidda, D. W., Abu Al-Rub, R. K., & Jasiuk, I. M. (2016). Finite element prediction of effective elastic properties of interpenetrating phase composites with architectured 3D sheet reinforcements. International Journal of Solids and Structures, 83, 169-182. DOI: 10.1016/j.ijsolstr.2016.01.011
 
Wang, X., Rahil, Z., Li, I. T. S., Chowdhury, F., Leckband, D. E., Chemla, Y. R., & Ha, T. (2016). Constructing modular and universal single molecule tension sensor using protein G to study mechano-sensitive receptors. Scientific Reports, 6, [21584]. DOI: 10.1038/srep21584
 
Goyal, S., Economou, A. E., Papadopoulos, T., Horstman, E. M., Zhang, G. G. Z., Gong, Y., & Kenis, P. J. A. (2016). Solvent compatible microfluidic platforms for pharmaceutical solid form screening. RSC Advances, 6(16), 13286-13296. DOI: 10.1039/c5ra26426j
 
Cho, S. W., Kim, H. J., Cho, Y. N., Jeong, J. H., & Kong, H. (2016). Top-down synthesis of polyaspartamide morphogens to derive platinum nanoclusters. Materials Letters, 168, 184-187. DOI: 10.1016/j.matlet.2016.01.055
 
Oruc, M. E., Desai, A. V., Nuzzo, R. G., & Kenis, P. J. A. (2016). Design, fabrication, and characterization of a proposed microchannel water electrolyzer. Journal of Power Sources, 307, 122-128. DOI: 10.1016/j.jpowsour.2015.12.062
 
Oruc, M. E., Desai, A. V., Kenis, P. J. A., & Nuzzo, R. G. (2016). Comprehensive energy analysis of a photovoltaic thermal water electrolyzer. Applied Energy, 164, 294-302. DOI: 10.1016/j.apenergy.2015.11.078
 
Sabet, F. A., Najafi, A. R., Hamed, E., & Jasiuk, I. (2016). Modelling of bone fracture and strength at different length scales: A review. Interface Focus, 6(1), [20150055]. DOI: 10.1098/rsfs.2015.0055
 
Ma, S., Sadakiyo, M., Luo, R., Heima, M., Yamauchi, M., & Kenis, P. J. A. (2016). One-step electrosynthesis of ethylene and ethanol from CO2 in an alkaline electrolyzer. Journal of Power Sources, 301, 219-228. DOI: 10.1016/j.jpowsour.2015.09.124
 
Oberst, J. L., Jhong, H. R. . M., Kenis, P. J. A., & Gewirth, A. A. (2016). Insight into the electrochemical reduction of CO2 on gold via surface-enhanced Raman spectroscopy and N-containing additives. Journal of Solid State Electrochemistry, 20(4), 1149-1154. DOI: 10.1007/s10008-015-2874-z