Ghaffari, S., Hanson, C., Schmidt, R. E., Bouchonville, K. J., Offer, S. M., & Sinha, S. (2021). An integrated multi-omics approach to identify regulatory mechanisms in cancer metastatic processes. Genome biology, 22(1), [19]. https://doi.org/10.1186/s13059-020-02213-x
Zwilling, C. E., Strang, A., Anderson, E., Jurcsisn, J., Johnson, E., Das, T., Kuchan, M. J., & Barbey, A. K. (2021). Author Correction: Enhanced physical and cognitive performance in active duty Airmen: evidence from a randomized multimodal physical fitness and nutritional intervention (Scientific Reports, (2020), 10, 1, (17826), 10.1038/s41598-020-74140-7). Scientific reports, 11(1), [3820]. https://doi.org/10.1038/s41598-021-81800-9
Witt, K. E., Yarlagadda, K., Allen, J. M., Bader, A. C., Simon, M. L., Kuehn, S. R., Swanson, K. S., Cross, T. W. L., Hedman, K. M., Ambrose, S. H., & Malhi, R. S. (2021). Author Correction: Integrative analysis of DNA, macroscopic remains and stable isotopes of dog coprolites to reconstruct community diet (Scientific Reports, (2021), 11, 1, (3113), 10.1038/s41598-021-82362-6). Scientific reports, 11(1), [11445]. https://doi.org/10.1038/s41598-021-90889-x
Brandt, J. R., Saidah, S. H., Zhao, K., Ishida, Y., Apriyana, I., Ryder, O. A., Ramono, W., Sudoyo, H., Suryadi, H., Van Coeverden de Groot, P. J., & Roca, A. L. (2021). Characterization of 29 polymorphic microsatellite markers developed by genomic screening of Sumatran rhinoceros (Dicerorhinus sumatrensis). BMC Research Notes, 14(1), [119]. https://doi.org/10.1186/s13104-021-05522-x
Emad, A., & Sinha, S. (2021). Inference of phenotype-relevant transcriptional regulatory networks elucidates cancer type-specific regulatory mechanisms in a pan-cancer study. npj Systems Biology and Applications, 7(1), [9]. https://doi.org/10.1038/s41540-021-00169-7
Witt, K. E., Yarlagadda, K., Allen, J. M., Bader, A. C., Simon, M. L., Kuehn, S. R., Swanson, K. S., Cross, T. W. L., Hedman, K. M., Ambrose, S. H., & Malhi, R. S. (2021). Integrative analysis of DNA, macroscopic remains and stable isotopes of dog coprolites to reconstruct community diet. Scientific reports, 11(1), [3113]. https://doi.org/10.1038/s41598-021-82362-6
Mahajan, T., & Dar, R. D. (2021). Internetwork connectivity of molecular networks across species of life. Scientific reports, 11(1), [1168]. https://doi.org/10.1038/s41598-020-80745-9
McEwen, G. K., Alquezar-Planas, D. E., Dayaram, A., Gillett, A., Tarlinton, R., Mongan, N., Chappell, K. J., Henning, J., Tan, M., Timms, P., Young, P. R., Roca, A. L., & Greenwood, A. D. (2021). Retroviral integrations contribute to elevated host cancer rates during germline invasion. Nature communications, 12(1), [1316]. https://doi.org/10.1038/s41467-021-21612-7
Jin, D., Song, X., Yu, Z., Liu, Z., Zhang, H., Cheng, Z., & Han, J. (2021). BiTe-GCN: A New GCN Architecture via Bidirectional Convolution of Topology and Features on Text-Rich Networks. In WSDM 2021 - Proceedings of the 14th ACM International Conference on Web Search and Data Mining (pp. 157-165). (WSDM 2021 - Proceedings of the 14th ACM International Conference on Web Search and Data Mining). Association for Computing Machinery, Inc. https://doi.org/10.1145/3437963.3441774
Zhang, Y., Chen, X., Meng, Y., & Han, J. (2021). Hierarchical Metadata-Aware Document Categorization under Weak Supervision. In WSDM 2021 - Proceedings of the 14th ACM International Conference on Web Search and Data Mining (pp. 770-778). (WSDM 2021 - Proceedings of the 14th ACM International Conference on Web Search and Data Mining). Association for Computing Machinery, Inc. https://doi.org/10.1145/3437963.3441730
Reiner Brodetzki, T., Lotem, A., Safran, R. J., & Hauber, M. E. (2021). Lack of subspecies-recognition in breeding Barn Swallows (Hirundo rustica transitiva). Behavioural Processes, 189, [104422]. https://doi.org/10.1016/j.beproc.2021.104422
Pollock, H. S., Hoover, J. P., Uy, F. M. K., & Hauber, M. E. (2021). Brood Parasites Are a Heterogeneous and Functionally Distinct Class of Natural Enemies. Trends in Parasitology, 37(7), 588-596. https://doi.org/10.1016/j.pt.2021.02.005
Lewis, J. A., Mendenhall, R., Ojiemwen, A., Thomas, M., Riopelle, C., Harwood, S. A., & Browne Huntt, M. (2021). Racial Microaggressions and Sense of Belonging at a Historically White University. American Behavioral Scientist, 65(8), 1049-1071. https://doi.org/10.1177/0002764219859613
Murugan, A., Husain, K., Rust, M., Bass, J. T., Hepler, C., Pietsch, J. M. J., Swain, P. S., Toettcher, J. E., Jena, S., Chakraborty, A. K., Sprenger, K. G., Mora, T., Walczak, A., Rivoire, O., Wang, S., Wood, K., Kussell, E., Skanata, A., Ranganathan, R., ... Goldenfeld, N. (2021). Roadmap on biology in time varying environments. Physical Biology, 18(4), [041502]. https://doi.org/10.1088/1478-3975/abde8d
Antonson, N. D., Rivera, M., Abolins-Abols, M., Kleindorfer, S., Liu, W. C., & Hauber, M. E. (2021). Early acoustic experience alters genome-wide methylation in the auditory forebrain of songbird embryos. Neuroscience Letters, 755, [135917]. https://doi.org/10.1016/j.neulet.2021.135917
Flucher, S. M., Krapf, P., Arthofer, W., Suarez, A. V., Crozier, R. H., Steiner, F. M., & Schlick-Steiner, B. C. (2021). Effect of social structure and introduction history on genetic diversity and differentiation. Molecular ecology, 30(11), 2511-2527. https://doi.org/10.1111/mec.15911
Withers, S. J., Parsons, S., Hauber, M. E., Kendrick, A., & Lavery, S. D. (2021). Genetic divergence between isolated populations of the North Island New Zealand Rifleman (Acanthisitta chloris granti) implicates ancient biogeographic impacts rather than recent habitat fragmentation. Ecology and Evolution, 11(11), 5998-6014. https://doi.org/10.1002/ece3.7358
Barg, A., Dolecek, L., Gabrys, R., Katona, G. O. H., Korner, J., McGregor, A., Milenkovic, O., Mesnager, S., & Zemor, G. (2021). Guest Editorial Special Issue: 'From Deletion-Correction to Graph Reconstruction: In Memory of Vladimir I. Levenshtein'. IEEE Transactions on Information Theory, 67(6), 3187-3189. [9437360]. https://doi.org/10.1109/TIT.2021.3072555
Magory Cohen, T., Major, R. E., Kumar, R. S., Nair, M., Ewart, K. M., Hauber, M. E., & Dor, R. (2021). Rapid morphological changes as agents of adaptation in introduced populations of the common myna (Acridotheres tristis). Evolutionary Ecology, 35(3), 443-462. https://doi.org/10.1007/s10682-021-10107-y
Behnke, G. D., Kim, N., Zabaloy, M. C., Riggins, C. W., Rodriguez-Zas, S., & Villamil, M. B. (2021). Soil Microbial Indicators within Rotations and Tillage Systems. Microorganisms, 9(6). https://doi.org/10.3390/microorganisms9061244
Blanco, A., Mahajan, T., Coronado, R. A., Ma, K., Demma, D. R., & Dar, R. D. (2021). Synergistic Chromatin-Modifying Treatments Reactivate Latent HIV and Decrease Migration of Multiple Host-Cell Types. Viruses, 13(6). https://doi.org/10.3390/v13061097
Turner, A. M., & Hauber, M. E. (2021). The American robin (Turdus migratorius): A focal species for anti-parasitic egg rejection studies among hosts of the brown-headed cowbird (Molothrus ater). Ethology, 127(6), 490-503. https://doi.org/10.1111/eth.13158
You, S., Chaney, E. J., Tu, H., Sun, Y., Sinha, S., & Boppart, S. A. (2021). Label-free deep profiling of the tumor microenvironment. Cancer Research, 81(9), 2534-2544. https://doi.org/10.1158/0008-5472.CAN-20-3124
Strickland, L. R., Fuller, R. C., Windsor, D., & Cáceres, C. E. (2021). A potential role for overdominance in the maintenance of colour variation in the Neotropical tortoise beetle, Chelymorpha alternans. Journal of Evolutionary Biology, 34(5), 779-791. https://doi.org/10.1111/jeb.13779
Wang, M., Monaco, M. H., Hauser, J., Yan, J., Dilger, R. N., & Donovan, S. M. (2021). Bovine milk oligosaccharides and human milk oligosaccharides modulate the gut microbiota composition and volatile fatty acid concentrations in a preclinical neonatal model. Microorganisms, 9(5), [884]. https://doi.org/10.3390/microorganisms9050884
Lawson, S. L., Enos, J. K., Mendes, N. C., Gill, S. A., & Hauber, M. E. (2021). Pairing status moderates both the production of and responses to anti-parasitic referential alarm calls in male yellow warblers. Ethology, 127(5), 385-394. https://doi.org/10.1111/eth.13139
Cerca, J., Maurstad, M. F., Rochette, N. C., Rivera-Colón, A. G., Rayamajhi, N., Catchen, J. M., & Struck, T. H. (2021). Removing the bad apples: A simple bioinformatic method to improve loci-recovery in de novo RADseq data for non-model organisms. Methods in Ecology and Evolution, 12(5), 805-817. https://doi.org/10.1111/2041-210X.13562
Atherton, O. E., Grijalva, E., Roberts, B. W., & Robins, R. W. (2021). Stability and Change in Personality Traits and Major Life Goals From College to Midlife. Personality and social psychology bulletin, 47(5), 841-858. https://doi.org/10.1177/0146167220949362
Lee, M. J., Rittschof, C. C., Greenlee, A. J., Turi, K. N., Rodriguez-Zas, S. L., Robinson, G. E., Cole, S. W., & Mendenhall, R. (2021). Transcriptomic Analyses of Black Women in Neighborhoods with High Levels of Violence. Psychoneuroendocrinology, 127, [105174]. https://doi.org/10.1016/j.psyneuen.2021.105174
Feng, S., Stiller, J., Deng, Y., Armstrong, J., Fang, Q., Reeve, A. H., Xie, D., Chen, G., Guo, C., Faircloth, B. C., Petersen, B., Wang, Z., Zhou, Q., Diekhans, M., Chen, W., Andreu-Sánchez, S., Margaryan, A., Howard, J. T., Parent, C., ... Zhang, G. (2021). Author Correction: Dense sampling of bird diversity increases power of comparative genomics (Nature, (2020), 587, 7833, (252-257), 10.1038/s41586-020-2873-9). Nature, 592(7856), E24. https://doi.org/10.1038/s41586-021-03473-8
Tkachenko, A. V., Maslov, S., Elbanna, A., Wong, G. N., Weiner, Z. J., & Goldenfeld, N. (2021). Time-dependent heterogeneity leads to transient suppression of the COVID-19 epidemic, not herd immunity. Proceedings of the National Academy of Sciences of the United States of America, 118(17). https://doi.org/10.1073/pnas.2015972118
Lu, Y., Singh, H., Singh, A., & Dar, R. D. (2021). A transient heritable memory regulates HIV reactivation from latency. iScience, 24(4), [102291]. https://doi.org/10.1016/j.isci.2021.102291
von Schaumburg, P., Rodriguez-Zas, S. L., Southey, B. R., de Godoy, M., He, F., & Parsons, C. M. (2021). White and red sorghum as primary carbohydrate sources in extruded diets of felines. Frontiers in Veterinary Science, 8, [668255]. https://doi.org/10.3389/fvets.2021.668255
Clark, D. L., Hauber, M. E., & Anderson, P. S. L. (2021). Nest substrate and tool shape significantly affect the mechanics and energy requirements of avian eggshell puncture. The Journal of experimental biology, 224(8), [jeb.238832]. https://doi.org/10.1242/jeb.238832
Capodiferro, M. R., Aram, B., Raveane, A., Rambaldi Migliore, N., Colombo, G., Ongaro, L., Rivera, J., Mendizábal, T., Hernández-Mora, I., Tribaldos, M., Perego, U. A., Li, H., Scheib, C. L., Modi, A., Gòmez-Carballa, A., Grugni, V., Lombardo, G., Hellenthal, G., Pascale, J. M., ... Achilli, A. (2021). Archaeogenomic distinctiveness of the Isthmo-Colombian area. Cell, 184(7), 1706-1723.e24. https://doi.org/10.1016/j.cell.2021.02.040
Chembazhi, U. V., Bangru, S., Hernaez, M., & Kalsotra, A. (2021). Cellular plasticity balances the metabolic and proliferation dynamics of a regenerating liver. Genome Research, 31(4), 576-591. https://doi.org/10.1101/gr.267013.120
Scharf, H. M., Abolins-Abols, M., Stenstrom, K. H., Tolman, D. T., Schelsky, W. M., & Hauber, M. E. (2021). Exposure to a mimetic or non-mimetic model avian brood parasite egg does not produce differential glucocorticoid responses in an egg-accepter host species. General and Comparative Endocrinology, 304, [113723]. https://doi.org/10.1016/j.ygcen.2021.113723
Gulley, J. M., & Izenwasser, S. (2021). Adolescent drug addiction. Pharmacology Biochemistry and Behavior, 203, [173151]. https://doi.org/10.1016/j.pbb.2021.173151
Fleming, S. A., Hauser, J., Yan, J., Donovan, S. M., Wang, M., & Dilger, R. N. (2021). A Mediation Analysis to Identify Links between Gut Bacteria and Memory in Context of Human Milk Oligosaccharides. Microorganisms, 9(4), [846]. https://doi.org/10.3390/microorganisms9040846
Wang, Y., & Zhao, S. D. (2021). A nonparametric empirical Bayes approach to large-scale multivariate regression. Computational Statistics and Data Analysis, 156, [107130]. https://doi.org/10.1016/j.csda.2020.107130
Rymut, H. E., Rund, L. A., Bolt, C. R., Villamil, M. B., Bender, D. E., Southey, B. R., Johnson, R. W., & Rodriguez-Zas, S. L. (2021). Biochemistry and immune biomarkers indicate interacting effects of pre-and postnatal stressors in pigs across sexes. Animals, 11(4), [987]. https://doi.org/10.3390/ani11040987
Alfaro, G. F., Rodriguez-Zas, S. L., Southey, B. R., Muntifering, R. B., Rodning, S. P., Pacheco, W. J., & Moisá, S. J. (2021). Complete blood count analysis on beef cattle exposed to fescue toxicity and rumen-protected niacin supplementation. Animals, 11(4), [988]. https://doi.org/10.3390/ani11040988
Wickland, D. P., Ren, Y., Sinnwell, J. P., Reddy, J. S., Pottier, C., Sarangi, V., Carrasquillo, M. M., Ross, O. A., Younkin, S. G., Ertekin-Taner, N., Rademakers, R., Hudson, M. E., Mainzer, L. S., Biernacka, J. M., & Asmann, Y. W. (2021). Impact of variant-level batch effects on identification of genetic risk factors in large sequencing studies. PloS one, 16(4 April), [e0249305]. https://doi.org/10.1371/journal.pone.0249305
Luo, J., Zhang, B., & Roberts, B. W. (2021). Sensitization or inoculation: Investigating the effects of early adversity on personality traits and stress experiences in adulthood. PloS one, 16(4), [e0248822]. https://doi.org/10.1371/journal.pone.0248822
Scharf, H. M., Hauber, M. E., Mommer, B. C., Hoover, J. P., & Schelsky, W. M. (2021). The effect of avian brood parasitism on physiological responses of host nestlings. Oecologia, 195(4), 861-872. https://doi.org/10.1007/s00442-021-04888-w
Chen, E., Zielinski, C., Deno, J., Singh, R., Bell, A. M., & Hellmann, J. K. (2021). The specificity of sperm-mediated paternal effects in threespine sticklebacks. Behavioral Ecology and Sociobiology, 75(4), [68]. https://doi.org/10.1007/s00265-021-03001-8
Southey, B. R., Zhang, P., Keever, M. R., Rymut, H. E., Johnson, R. W., Sweedler, J. V., & Rodriguez-Zas, S. L. (2021). Effects of maternal immune activation in porcine transcript isoforms of neuropeptide and receptor genes. Journal of Integrative Neuroscience, 20(1), 21-31. https://doi.org/10.31083/j.jin.2021.01.332
Farahany, N. A., & Robinson, G. E. (2021). The rise and fall of the “warrior gene” defense. Science, 371(6536), 1320-1320. https://doi.org/10.1126/science.abh4479
Lu, Y., Bohn-Wippert, K., Pazerunas, P. J., Moy, J. M., Singh, H., & Dar, R. D. (2021). Screening for gene expression fluctuations reveals latency-promoting agents of HIV. Proceedings of the National Academy of Sciences of the United States of America, 118(11), [e2012191118]. https://doi.org/10.1073/pnas.2012191118
Schartl, M., Kneitz, S., Ormanns, J., Schmidt, C., Anderson, J. L., Amores, A., Catchen, J., Wilson, C., Geiger, D., Du, K., Garcia-Olazábal, M., Sudaram, S., Winkler, C., Hedrich, R., Warren, W. C., Walter, R., Meyer, A., & Postlethwait, J. H. (2021). The Developmental and Genetic Architecture of the Sexually Selected Male Ornament of Swordtails. Current Biology, 31(5), 911-922.e4. https://doi.org/10.1016/j.cub.2020.11.028
Booher, D. B., Gibson, J. C., Liu, C., Longino, J. T., Fisher, B. L., Janda, M., Narula, N., Toulkeridou, E., Mikheyev, A. S., Suarez, A. V., & Economo, E. P. (2021). Functional innovation promotes diversification of form in the evolution of an ultrafast trap-jaw mechanism in ants. PLoS biology, 19(3), [e3001031]. https://doi.org/10.1371/journal.pbio.3001031
Roca, A. L. (2021). Million-year-old DNA provides a glimpse of mammoth evolution. Nature, 591(7849), 208-209. https://doi.org/10.1038/d41586-021-00348-w
Fine, J. D., Torres, K. M., Martin, J., & Robinson, G. E. (2021). Assessing agrochemical risk to mated honey bee queens. Journal of Visualized Experiments, 2021(169), 1-16. [e62316]. https://doi.org/10.3791/62316
Ruzi, S. A., Zalamea, P. C., Roche, D. P., Achury, R., Dalling, J. W., & Suarez, A. V. (2021). Can variation in seed removal patterns of Neotropical pioneer tree species be explained by local ant community composition? Biotropica, 53(2), 619-631. https://doi.org/10.1111/btp.12904
Marton, A., Fülöp, A., Bán, M., Hauber, M. E., & Moskát, C. (2021). Female common cuckoo calls dampen the mobbing intensity of great reed warbler hosts. Ethology, 127(3), 286-293. https://doi.org/10.1111/eth.13126
Chatterjee, P., & Goldenfeld, N. (2021). Field-theoretic model for chemotaxis in run and tumble particles. Physical Review E, 103(3), [032603]. https://doi.org/10.1103/PhysRevE.103.032603
Martin, L. B., Hanson, H. E., Hauber, M. E., & Ghalambor, C. K. (2021). Genes, Environments, and Phenotypic Plasticity in Immunology. Trends in Immunology, 42(3), 198-208. https://doi.org/10.1016/j.it.2021.01.002
Ducay, R. L., Luro, A. B., Hansen, E. S., & Hauber, M. E. (2021). Multicomponent shell traits are consistent with an individual recognition function of the appearance of common murre (Uria aalge) eggs: A biological replication study. Ecology and Evolution, 11(5), 2402-2409. https://doi.org/10.1002/ece3.7264
Chen, Z., Traniello, I. M., Rana, S., Cash-Ahmed, A. C., Sankey, A. L., Yang, C., & Robinson, G. E. (Accepted/In press). Neurodevelopmental and transcriptomic effects of CRISPR/Cas9-induced somatic orco mutation in honey bees. Journal of Neurogenetics, 1-13. https://doi.org/10.1080/01677063.2021.1887173
Fischer, E. K., Song, Y., Hughes, K. A., Zhou, W., & Hoke, K. L. (2021). Nonparallel transcriptional divergence during parallel adaptation. Molecular ecology, 30(6), 1516-1530. https://doi.org/10.1111/mec.15823
Achury, R., Holway, D. A., & Suarez, A. V. (2021). Pervasive and persistent effects of ant invasion and fragmentation on native ant assemblages. Ecology, 102(3), [e03257]. https://doi.org/10.1002/ecy.3257
Stieger, M., Flückiger, C., Rüegger, D., Kowatsch, T., Roberts, B. W., & Allemand, M. (2021). Changing personality traits with the help of a digital personality change intervention. Proceedings of the National Academy of Sciences of the United States of America, 118(8), [e2017548118]. https://doi.org/10.1073/pnas.2017548118
Roberts, B. W., & Nickel, L. B. (2021). Personality Development across the Life Course: A Neo-Socioanalytic Perspective. In O. P. John, & R. W. Robins (Eds.), Handbook of Personality: Theory and Research (4 ed., pp. 11). Guilford Press.
Perri, A. R., Feuerborn, T. R., Frantz, L. A. F., Larson, G., Malhi, R. S., Meltzer, D. J., & Witt, K. E. (2021). Dog domestication and the dual dispersal of people and dogs into the Americas. Proceedings of the National Academy of Sciences of the United States of America, 118(6), [e2010083118]. https://doi.org/10.1073/pnas.2010083118
You, J. S., Singh, N., Reyes-Ordonez, A., Khanna, N., Bao, Z., Zhao, H., & Chen, J. (2021). Erratum: ARHGEF3 regulates skeletal muscle regeneration and strength through autophagy (Cell Reports (2021) 34(1), (S2211124720315837), (10.1016/j.celrep.2020.108594)). Cell Reports, 34(6), [108731]. https://doi.org/10.1016/j.celrep.2021.108731
Cerca, J., Colon, A. G. R., Ferreira, M. S., Ravinet, M., Nowak, M. D., Catchen, J. M., & Struck, T. H. (2021). Incomplete lineage sorting and ancient admixture, and speciation without morphological change in ghost-worm cryptic species. PeerJ, 9, [e10896]. https://doi.org/10.7717/peerj.10896
de Flamingh, A., Coutu, A., Sealy, J., Chirikure, S., Bastos, A. D. S., Libanda-Mubusisi, N. M., Malhi, R. S., & Roca, A. L. (2021). Sourcing Elephant Ivory from a Sixteenth-Century Portuguese Shipwreck. Current Biology, 31(3), 621-628.e4. https://doi.org/10.1016/j.cub.2020.10.086
Tkachenko, A. V., Maslov, S., Wang, T., Elbanna, A., Wong, G. N., & Goldenfeld, N. (2021). Stochastic social behavior coupled to COVID-19 dynamics leads to waves, plateaus and an endemic state. (medRxiv). Cold Spring Harbor Laboratory Press. https://doi.org/10.1101/2021.01.28.21250701
Shinn, L. M., Li, Y., Mansharamani, A., Auvil, L. S., Welge, M. E., Bushell, C. B., Khan, N. A., Charron, C. S., Novotny, J. A., Baer, D. J., Zhu, R., & Holscher, H. D. (2021). Fecal Bacteria as Biomarkers for Predicting Food Intake in Healthy Adults. The Journal of nutrition, 151(2), 423-433. https://doi.org/10.1093/jn/nxaa285
Rutledge, S., Carr, D. E., Hauber, M. E., & Hanley, D. (2021). Best of a bad job or masters of illusion: Do nest light conditions make the eggs of brood parasitic brown-headed cowbirds (Molothrus ater) more similar to the eggs of their hosts? Ethology, 127(2), 117-124. https://doi.org/10.1111/eth.13109
Schmill, M. P., Cadney, M. D., Thompson, Z., Hiramatsu, L., Albuquerque, R. L., McNamara, M. P., Castro, A. A., Kay, J. C., Buenaventura, D. G., Ramirez, J. L., Rhodes, J. S., & Garland, T. (2021). Conditioned Place Preference for Cocaine and Methylphenidate in Female Mice from Lines Selectively Bred for High Voluntary Wheel-Running Behavior. Genes, Brain and Behavior, 20(2), [e12700]. https://doi.org/10.1111/gbb.12700
Rivera-Colón, A. G., Rochette, N. C., & Catchen, J. M. (2021). Simulation with RADinitio improves RADseq experimental design and sheds light on sources of missing data. Molecular ecology resources, 21(2), 363-378. https://doi.org/10.1111/1755-0998.13163
Soto, C. J., Napolitano, C. M., & Roberts, B. W. (2021). Taking Skills Seriously: Toward an Integrative Model and Agenda for Social, Emotional, and Behavioral Skills. Current Directions in Psychological Science, 30(1), 26-33. https://doi.org/10.1177/0963721420978613
Sacks, B. N., Lounsberry, Z. T., Rando, H. M., Kluepfel, K., Fain, S. R., Brown, S. K., & Kukekova, A. V. (2021). Sequencing Red Fox Y Chromosome Fragments to Develop Phylogenetically Informative SNP Markers and Glimpse Male-Specific Trans-Pacific Phylogeography. Genes, 12(1), 1-10. [97]. https://doi.org/10.3390/genes12010097
Ramp, J., Parker, C. G., Rhodes, J. S., & Malik, P. (2021). Comment on "service Dogs and Safety in Academic Laboratories". Journal of Chemical Education, 98(1), 250-251. https://doi.org/10.1021/acs.jchemed.0c00982
Calla, B., Demkovich, M., Siegel, J. P., Viana, J. P. G., Walden, K. K. O., Robertson, H. M., & Berenbaum, M. R. (2021). Selective sweeps in a nutshell: the genomic footprint of rapid insecticide resistance evolution in the almond agroecosystem. Genome biology and evolution, 13(1). https://doi.org/10.1093/gbe/evaa234
You, J-S., Singh, N., Reyes-Ordonez, A., Khanna, N., Bao, Z., Zhao, H., & Chen, J. (2021). ARHGEF3 Regulates Skeletal Muscle Regeneration and Strength through Autophagy. Cell Reports, 34(1), 108594. [108594]. https://doi.org/10.1016/j.celrep.2020.108594
Inzlicht, M., Werner, K. M., Briskin, J. L., & Roberts, B. W. (2021). Integrating Models of Self-Regulation. Annual review of psychology, 72, 319-345. https://doi.org/10.1146/annurev-psych-061020-105721
Hauber, M. E., Winnicki, S. K., Hoover, J. P., Hanley, D., & Hays, I. R. (2021). The limits of egg recognition: Testing acceptance thresholds of American robins in response to decreasingly egg-shaped objects in the nest. Royal Society Open Science, 8(1), [201615]. https://doi.org/10.1098/rsos.201615
Liu, X., Machado, R. A., & Milenkovic, O. (2021). Directed Intersection Representations and the Information Content of Digraphs. IEEE Transactions on Information Theory, 67(1), 347-357. [9236641]. https://doi.org/10.1109/TIT.2020.3033168
Moskát, C., Taylor, D. M., & Hauber, M. E. (2021). Effective conspecific communication with aberrant calls in the common cuckoo (Cuculus canorus). Behavioral Ecology and Sociobiology, 75(1), [7]. https://doi.org/10.1007/s00265-020-02946-6
Berdan, E. L., Fuller, R. C., & Kozak, G. M. (2021). Genomic landscape of reproductive isolation in Lucania killifish: The role of sex loci and salinity. Journal of Evolutionary Biology, 34(1), 157-174. https://doi.org/10.1111/jeb.13725
Kim, N., Riggins, C. W., Rodríguez-Zas, S., Zabaloy, M. C., & Villamil, M. B. (2021). Long-term residue removal under tillage decreases amoA-nitrifiers and stimulates nirS-denitrifier groups in the soil. Applied Soil Ecology, 157, [103730]. https://doi.org/10.1016/j.apsoil.2020.103730
Wetzel, E., Lang, F. J., Back, M. D., Vecchione, M., Rogoza, R., & Roberts, B. W. (2021). Measurement Invariance of Three Narcissism Questionnaires Across the United States, the United Kingdom, and Germany. Assessment, 28(1), 29-43. https://doi.org/10.1177/1073191120907967
Li, D., & Hauber, M. E. (2021). Parasitic begging calls of nestmate-evictor common cuckoos stimulate more parental provisions by red-winged blackbirds than calls of nest-sharing brown-headed cowbirds. Behavioral Ecology and Sociobiology, 75(1), [11]. https://doi.org/10.1007/s00265-020-02955-5
Tian, Y., & Smith-Bolton, R. K. (2021). Regulation of growth and cell fate during tissue regeneration by the two SWI/SNF chromatin-remodeling complexes of Drosophila. Genetics, 217(1), [iyaa028]. https://doi.org/10.1093/GENETICS/IYAA028
Hauber, M. E., Taylor, D. M., & Brawn, J. D. (2021). Variable or atypical? Comparing unusual songs of the Tufted Titmouse with a citizen-science database. Journal of Ornithology, 162(1), 313-316. https://doi.org/10.1007/s10336-020-01839-9
Hauber, M. E., Elek, Z., & Moskát, C. (Accepted/In press). Advancing onset of breeding dates in brood parasitic common cuckoos and their great reed warbler hosts over a 22-year period. Ethology Ecology and Evolution. https://doi.org/10.1080/03949370.2021.1871968
Zhao, S. D., & Biscarri, W. (Accepted/In press). A Regression Modeling Approach to Structured Shrinkage Estimation. Journal of the American Statistical Association. https://doi.org/10.1080/01621459.2021.1875838
You, J. S., & Chen, J. (2021). Autophagy-dependent regulation of skeletal muscle regeneration and strength by a RHOGEF. Autophagy, 17(4), 1044-1045. https://doi.org/10.1080/15548627.2021.1886721
Fulmer, A. G., & Hauber, M. E. (2021). Autopreening behaviour may convey information about internal social state in Arabian babbler (Turdoides squamiceps) allopreening dyads. Behaviour, 158(5), 427-446. https://doi.org/10.1163/1568539X-bja10073
Ramp, J., Parker, C. G., Rhodes, J. S., & Malik, P. (Accepted/In press). Barriers to inclusion: Service dog handlers in science laboratories. Disability and Health Journal, [101070]. https://doi.org/10.1016/j.dhjo.2021.101070
Zhang, C., & Han, J. (2021). Data Mining and Knowledge Discovery. In Urban Book Series (pp. 797-814). (Urban Book Series). Springer. https://doi.org/10.1007/978-981-15-8983-6_42
Winnicki, S. K., Strausberger, B. M., Antonson, N. D., Burhans, D. E., Lock, J., Kilpatrick, A. M., & Hauber, M. E. (2021). Developmental asynchrony and host species identity predict variability in nestling growth of an obligate brood parasite: A test of the growth-tuning hypothesis. Canadian journal of zoology, 99(3), 213-220. https://doi.org/10.1139/cjz-2020-0147
Taneja, I., Damhorst, G. L., Lopez-Espina, C., Zhao, S. D., Zhu, R., Khan, S., White, K., Kumar, J., Vincent, A., Yeh, L., Majdizadeh, S., Weir, W., Isbell, S., Skinner, J., Devanand, M., Azharuddin, S., Meenakshisundaram, R., Upadhyay, R., Syed, A., ... Bashir, R. (Accepted/In press). Diagnostic and prognostic capabilities of a biomarker and EMR-based machine learning algorithm for sepsis. Clinical and Translational Science. https://doi.org/10.1111/cts.13030
Edwards, C. G., Walk, A. M., Thompson, S. V., Reeser, G. E., Dilger, R. N., Erdman, J. W., Burd, N. A., Holscher, H. D., & Khan, N. A. (Accepted/In press). Dietary lutein plus zeaxanthin and choline intake is interactively associated with cognitive flexibility in middle-adulthood in adults with overweight and obesity. Nutritional Neuroscience. https://doi.org/10.1080/1028415X.2020.1866867
Lawson, S. L., Enos, J. K., Antonson, N. D., Gill, S. A., & Hauber, M. E. (Accepted/In press). Do hosts of avian brood parasites discriminate parasitic vs. predatory threats? A meta-analysis. In Advances in the Study of Behavior (Advances in the Study of Behavior). Academic Press Inc.. https://doi.org/10.1016/bs.asb.2021.03.002
Zhang, P., Southey, B. R., Sweedler, J. V., Pradhan, A., & Rodriguez-Zas, S. L. (2021). Enhanced understanding of molecular interactions and function underlying pain processes through networks of transcript isoforms, genes, and gene families. Advances and Applications in Bioinformatics and Chemistry, 14, 49-69. https://doi.org/10.2147/AABC.S284986
Guo, B., Holscher, H. D., Auvil, L. S., Welge, M. E., Bushell, C. B., Novotny, J. A., Baer, D. J., Burd, N. A., Khan, N. A., & Zhu, R. (Accepted/In press). Estimating Heterogeneous Treatment Effect on Multivariate Responses Using Random Forests. Statistics in Biosciences. https://doi.org/10.1007/s12561-021-09310-w
Zhu, W., Gong, H., Shen, J., Zhang, C., Shang, J., Bhat, S., & Han, J. (2021). FUSE: Multi-faceted Set Expansion by Coherent Clustering of Skip-Grams. In F. Hutter, K. Kersting, J. Lijffijt, & I. Valera (Eds.), Machine Learning and Knowledge Discovery in Databases - European Conference, ECML PKDD 2020, Proceedings (pp. 617-632). (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); Vol. 12459 LNAI). Springer. https://doi.org/10.1007/978-3-030-67664-3_37
Hudson, K. A., & Hudson, M. E. (Accepted/In press). Genetic Variation for Seed Oil Biosynthesis in Soybean. Plant Molecular Biology Reporter. https://doi.org/10.1007/s11105-020-01276-1
Dau, S. H., Dinh, T. X., Kiah, H. M., Luong, T. T., & Milenkovic, O. (Accepted/In press). Repairing Reed-Solomon Codes via Subspace Polynomials. IEEE Transactions on Information Theory. https://doi.org/10.1109/TIT.2021.3071878
Cross, K. J., Mendenhall, R., Clancy, K. B. H., Imoukhuede, P., & Amos, J. (2021). The Pieces of Me: The Double Bind of Race and Gender in Engineering. Journal of Women and Minorities in Science and Engineering, 27(3), 79-105. https://doi.org/10.1615/JWomenMinorScienEng.2021034902
Rodrigues, M. A., Mendenhall, R., & Clancy, K. B. H. (2021). "There's realizing, and then there’s realizing": How social support can counter gaslighting of women of color scientists. Journal of Women and Minorities in Science and Engineering, 27(2), 1-23. https://doi.org/10.1615/JWomenMinorScienEng.2020034630
Shen, W., Yin, Y., Yang, Y., Han, J., Wang, J., & Yuan, X. (Accepted/In press). Toward Tweet Entity Linking with Heterogeneous Information Networks. IEEE Transactions on Knowledge and Data Engineering. https://doi.org/10.1109/TKDE.2021.3068093
King, W. P., Amos, J., Azer, M., Baker, D., Bashir, R., Best, C., Bethke, E., Boppart, S. A., Bralts, E., Corey, R. M., Dietkus, R., Durack, G., Elbel, S., Elliott, G., Fava, J., Goldenfeld, N., Goldstein, M. H., Hayes, C., Herndon, N., ... Wooldridge, A. R. (2020). Emergency ventilator for COVID-19. PloS one, 15(12), e0244963. [e0244963]. https://doi.org/10.1371/journal.pone.0244963
Jones, B. M., Rao, V. D., Gernat, T., Jagla, T., Cash-ahmed, A. C., Rubin, B. E., Comi, T. J., Bhogale, S., Husain, S. S., Blatti, C., Middendorf, M., Sinha, S., Chandrasekaran, S., & Robinson, G. E. (2020). Individual differences in honey bee behavior enabled by plasticity in brain gene regulatory networks. eLife, 9. https://doi.org/10.7554/eLife.62850
Choi, S. H., Rao, V. D., Gernat, T., Hamilton, A. R., Robinson, G. E., & Goldenfeld, N. (2020). Individual variations lead to universal and cross-species patterns of social behavior. Proceedings of the National Academy of Sciences of the United States of America, 117(50), 31754-31759. https://doi.org/10.1073/pnas.2002013117
Hiscox, L. V., McGarry, M. D. J., Schwarb, H., Van Houten, E. E. W., Pohlig, R. T., Roberts, N., Huesmann, G. R., Burzynska, A. Z., Sutton, B. P., Hillman, C. H., Kramer, A. F., Cohen, N. J., Barbey, A. K., Paulsen, K. D., & Johnson, C. L. (2020). Standard-space atlas of the viscoelastic properties of the human brain. Human Brain Mapping, 41(18), 5282-5300. https://doi.org/10.1002/hbm.25192
Buonasera, T., Eerkens, J., de Flamingh, A., Engbring, L., Yip, J., Li, H., Haas, R., DiGiuseppe, D., Grant, D., Salemi, M., Nijmeh, C., Arellano, M., Leventhal, A., Phinney, B., Byrd, B. F., Malhi, R. S., & Parker, G. (2020). A comparison of proteomic, genomic, and osteological methods of archaeological sex estimation. Scientific reports, 10(1), [11897]. https://doi.org/10.1038/s41598-020-68550-w
Yazdi, S. M. H. T., Gabrys, R., & Milenkovic, O. (2020). Author Correction: Portable and Error-Free DNA-Based Data Storage (Scientific Reports, (2017), 7, 1, (5011), 10.1038/s41598-017-05188-1). Scientific reports, 10(1), [7026]. https://doi.org/10.1038/s41598-020-60080-9
Tabatabaei, S. K., Wang, B., Athreya, N. B. M., Enghiad, B., Hernandez, A. G., Fields, C. J., Leburton, J. P., Soloveichik, D., Zhao, H., & Milenkovic, O. (2020). DNA punch cards for storing data on native DNA sequences via enzymatic nicking. Nature communications, 11(1), [1742]. https://doi.org/10.1038/s41467-020-15588-z
McGhee, K. E., Paitz, R. T., Baker, J. A., Foster, S. A., & Bell, A. M. (2020). Effects of predation risk on egg steroid profiles across multiple populations of threespine stickleback. Scientific reports, 10(1), [5239]. https://doi.org/10.1038/s41598-020-61412-5
Zwilling, C. E., Strang, A., Anderson, E., Jurcsisn, J., Johnson, E., Das, T., Kuchan, M. J., & Barbey, A. K. (2020). Enhanced physical and cognitive performance in active duty Airmen: evidence from a randomized multimodal physical fitness and nutritional intervention. Scientific reports, 10(1), [17826]. https://doi.org/10.1038/s41598-020-74140-7
Mitros, T., Session, A. M., James, B. T., Wu, G. A., Belaffif, M. B., Clark, L. V., Shu, S., Dong, H., Barling, A., Holmes, J. R., Mattick, J. E., Bredeson, J. V., Liu, S., Farrar, K., Głowacka, K., Jeżowski, S., Barry, K., Chae, W. B., Juvik, J. A., ... Rokhsar, D. S. (2020). Genome biology of the paleotetraploid perennial biomass crop Miscanthus. Nature communications, 11(1), [5442]. https://doi.org/10.1038/s41467-020-18923-6
Smith, B. P., Auvil, L. S., Welge, M., Bushell, C. B., Bhargava, R., Elango, N., Johnson, K., & Madak-Erdogan, Z. (2020). Identification of early liver toxicity gene biomarkers using comparative supervised machine learning. Scientific reports, 10(1), [19128]. https://doi.org/10.1038/s41598-020-76129-8
Lee, M. J., Collins, J. D., Harwood, S. A., Mendenhall, R., & Huntt, M. B. (2020). “If you aren’t White, Asian or Indian, you aren’t an engineer”: racial microaggressions in STEM education. International Journal of STEM Education, 7(1), [48]. https://doi.org/10.1186/s40594-020-00241-4
Athreya, N., Milenkovic, O., & Leburton, J. P. (2020). Interaction dynamics and site-specific electronic recognition of DNA-nicks with 2D solid-state nanopores. npj 2D Materials and Applications, 4(1), [32]. https://doi.org/10.1038/s41699-020-00166-0
Traniello, I. M., Bukhari, S. A., Kevill, J., Ahmed, A. C., Hamilton, A. R., Naeger, N. L., Schroeder, D. C., & Robinson, G. E. (2020). Meta-analysis of honey bee neurogenomic response links Deformed wing virus type A to precocious behavioral maturation. Scientific reports, 10(1), [3101]. https://doi.org/10.1038/s41598-020-59808-4
Pindus, D. M., Zwilling, C. E., Jarrett, J. S., Talukdar, T., Schwarb, H., Anderson, E., Cohen, N. J., Barbey, A. K., Kramer, A. F., & Hillman, C. H. (2020). Opposing associations between sedentary time and decision-making competence in young adults revealed by functional connectivity in the dorsal attention network. Scientific reports, 10(1), [13993]. https://doi.org/10.1038/s41598-020-70679-7
De Flamingh, A., Coutu, A., Sealy, J., Chirikure, S., Bastos, A. D. S., Libanda-Mubusisi, N. M., Malhi, R. S., & Roca, A. L. (Accepted/In press). Sourcing Elephant Ivory from a Sixteenth-Century Portuguese Shipwreck. Current Biology. https://doi.org/10.1016/j.cub.2020.10.086
Phillips, E., DeAngelis, R., Gogola, J. V., & Rhodes, J. S. (2020). Spontaneous alloparental care of unrelated offspring by non-breeding Amphiprion ocellaris in absence of the biological parents. Scientific reports, 10(1), [4610]. https://doi.org/10.1038/s41598-020-61537-7
Chang, C. H., & Fuller, R. C. (2020). The Eye Size of the Bluefin Killifish (Lucania goodei) Varies from Springs to Swamps. Copeia, 108(4), 758-766. https://doi.org/10.1643/CI-19-330
Westbrook, S. R., & Gulley, J. M. (2020). Effects of the GluN2B antagonist, Ro 25-6981, on extinction consolidation following adolescent- or adult-onset methamphetamine self-administration in male and female rats. Behavioural Pharmacology, 31(8), 748-758. https://doi.org/10.1097/FBP.0000000000000586
Gardner, J. C., Dvoretskiy, S. V., Yang, Y., Venkataraman, S., Lange, D. A., Li, S., Boppart, A. L., Kim, N., Rendeiro, C., Boppart, M. D., & Rhodes, J. S. (2020). Electrically stimulated hind limb muscle contractions increase adult hippocampal astrogliogenesis but not neurogenesis or behavioral performance in male C57BL/6J mice. Scientific reports, 10(1), [19319]. https://doi.org/10.1038/s41598-020-76356-z
Achury, R., Chacón de Ulloa, P., Arcila, Á., & Suarez, A. V. (2020). Habitat disturbance modifies dominance, coexistence, and competitive interactions in tropical ant communities. Ecological Entomology, 45(6), 1247-1262. https://doi.org/10.1111/een.12908
Hellmann, J. K., Bukhari, S. A., Deno, J., & Bell, A. M. (2020). Sex-specific plasticity across generations I: Maternal and paternal effects on sons and daughters. Journal of Animal Ecology, 89(12), 2788-2799. https://doi.org/10.1111/1365-2656.13364
Hellmann, J. K., Carlson, E. R., & Bell, A. M. (2020). Sex-specific plasticity across generations II: Grandpaternal effects are lineage specific and sex specific. Journal of Animal Ecology, 89(12), 2800-2812. https://doi.org/10.1111/1365-2656.13365
Stamps, J. A., & Bell, A. M. (2020). The information provided by the absence of cues: insights from Bayesian models of within and transgenerational plasticity. Oecologia, 194(4), 585-596. https://doi.org/10.1007/s00442-020-04792-9
Gernat, T., Jagla, T., Jones, B. M., Middendorf, M., & Robinson, G. E. (2020). Automated monitoring of animal behaviour with barcodes and convolutional neural networks. Unknown Journal. https://doi.org/10.1101/2020.11.27.401760
Rymut, H. E., Bolt, C. R., Caputo, M. P., Houser, A. K., Antonson, A. M., Zimmerman, J. D., Villamil, M. B., Southey, B. R., Rund, L. A., Johnson, R. W., & Rodriguez-Zas, S. L. (2020). Long-Lasting Impact of Maternal Immune Activation and Interaction With a Second Immune Challenge on Pig Behavior. Frontiers in Veterinary Science, 7, [561151]. https://doi.org/10.3389/fvets.2020.561151
Achury, R., Holway, D. A., & Suarez, A. V. (Accepted/In press). Pervasive and persistent effects of ant invasion and fragmentation on native ant assemblages. Ecology, [e03257]. https://doi.org/10.1002/ecy.3257
Saha, A., Seward, C. H., Stubbs, L., & Mizzen, C. A. (2020). Site-Specific Phosphorylation of Histone H1.4 Is Associated with Transcription Activation. International journal of molecular sciences, 21(22), 1-21. [8861]. https://doi.org/10.3390/ijms21228861
Hedman, H. D., Varga, C., Brown, W. M., Shelton, P., Roca, A. L., Novakofski, J. E., & Mateus‐Pinilla, N. E. (2020). Spatial analysis of chronic wasting disease in free‐ranging white‐tailed deer ( Odocoileus virginianus ) in Illinois, 2008–2019. Transboundary and Emerging Diseases. https://doi.org/10.1111/tbed.13901
Wong, G. N., Weiner, Z. J., Tkachenko, A. V., Elbanna, A., Maslov, S., & Goldenfeld, N. (2020). Modeling COVID-19 Dynamics in Illinois under Nonpharmaceutical Interventions. Physical Review X, 10(4), [041033]. https://doi.org/10.1101/2020.06.03.20120691, https://doi.org/10.1103/PhysRevX.10.041033
Liu, X., & Milenkovic, O. (2020). Finding the second-best candidate under the mallows model. Unknown Journal.
Park, J., Jayaraman, A., Schrader, A. W., Hwang, G. W., & Han, H-S. (2020). Controllable modulation of precursor reactivity using chemical additives for systematic synthesis of high-quality quantum dots. Nature communications, 11(1), 5748. https://doi.org/10.1038/s41467-020-19573-4
Kim, N., Zabaloy, M. C., Riggins, C. W., Rodríguez-Zas, S., & Villamil, M. B. (2020). Microbial Shifts Following Five Years of Cover Cropping and Tillage Practices in Fertile Agroecosystems. Microorganisms, 8(11), [1773]. https://doi.org/10.3390/microorganisms8111773
Gabrys, R., Pattabiraman, S., Rana, V., Ribeiro, J., Cheraghchi, M., Guruswami, V., & Milenkovic, O. (2020). AC-DC: Amplification Curve Diagnostics for Covid-19 Group Testing. (arXiv:2011.05223).
Chatterjee, P., & Goldenfeld, N. (2020). A field-theoretic model for chemotaxis in run and tumble particles. Unknown Journal.
Tabe-Bordbar, S., Song, Y. J., Lunt, B. J., Prasanth, K. V., & Sinha, S. (2020). Mechanistic analysis of enhancer sequences in the Estrogen Receptor transcriptional program. Unknown Journal. https://doi.org/10.1101/2020.11.08.373555
Xie, Y. R., Castro, D. C., Lam, F., & Sweedler, J. V. (2020). Accelerating Fourier Transform-Ion Cyclotron Resonance Mass Spectrometry Imaging Using a Subspace Approach. Journal of the American Society for Mass Spectrometry, 31(11), 2338-2347. https://doi.org/10.1021/jasms.0c00276
Calla, B., Demkovich, M., Siegel, J. P., Viana, J. P. G., Walden, K. K. O., Robertson, H. M., & Berenbaum, M. R. (2020). Selective sweeps in a nutshell: the genomic footprint of rapid insecticide resistance evolution in the almond agroecosystem. Genome biology and evolution. https://doi.org/10.1093/gbe/evaa234
Eagleman, D. E., Zhu, J., Liu, D. C., Seimetz, J., Kalsotra, A., & Tsai, N. P. (2020). Unbiased Proteomic Screening Identifies a Novel Role for the E3 Ubiquitin Ligase Nedd4-2 in Translational Suppression During ER Stress. Journal of Neurochemistry. https://doi.org/10.1111/jnc.15219
Chee, Y. M., Colbourn, C. J., Dau, H., Gabrys, R., Ling, A. C. H., Lusi, D., & Milenkovic, O. (2020). Access balancing in storage systems by labeling partial Steiner systems. Designs, Codes, and Cryptography, 88(11), 2361-2376. https://doi.org/10.1007/s10623-020-00786-z
Hauber, M. E., Heath, S. K., & Tonra, C. M. (2020). Direct Estimates of Breeding Site Fidelity and Natal Philopatry in Brood Parasitic Brown-Headed Cowbirds Molothrus ater. Ardea, 108(2), 129-137. https://doi.org/10.5253/arde.v108i2.a6
Anderson, P. S. L., Rivera, M. D., & Suarez, A. (2020). “Simple” Biomechanical Model for Ants Reveals How Correlated Evolution among Body Segments Minimizes Variation in Center of Mass as Heads Get Larger. Integrative and comparative biology, 60(5), 1193-1207. https://doi.org/10.1093/icb/icaa027
Westbrook, S. R., Carrica, L. K., Banks, A., & Gulley, J. M. (2020). AMPed-up adolescents: The role of age in the abuse of amphetamines and its consequences on cognition and prefrontal cortex development. Pharmacology Biochemistry and Behavior, 198, [173016]. https://doi.org/10.1016/j.pbb.2020.173016
SUN, QINYU., HAO, QINYU., LIN, YO. CHUEN., SONG, YOU. JIN., BANGRU, SUSHANT., ARIF, WAQAR., TRIPATHI, VIDISHA., ZHANG, YANG., CHO, JUNG. HYUN., FREIER, SUSAN. M., JENKINS, LISA. M., MA, JIAN., YOON, JE. HYUN., KALSOTRA, AUINASH., LAL, ASHISH., PRASANTH, SUPRIYA. G., & PRASANTH, KANNANGANATTU. V. (2020). Antagonism between splicing and microprocessor complex dictates the serum-induced processing of lnc-MIRHG for efficient cell cycle reentry. RNA, 26(11), 1603-1620. https://doi.org/10.1261/rna.075309.120
Feng, S., Stiller, J., Deng, Y., Armstrong, J., Fang, Q., Reeve, A. H., Xie, D., Chen, G., Guo, C., Faircloth, B. C., Petersen, B., Wang, Z., Zhou, Q., Diekhans, M., Chen, W., Andreu-Sánchez, S., Margaryan, A., Howard, J. T., Parent, C., ... Zhang, G. (2020). Dense sampling of bird diversity increases power of comparative genomics. Nature, 587(7833), 252-257. https://doi.org/10.1038/s41586-020-2873-9
Pinedo, P., Santos, J. E. P., Chebel, R. C., Galvão, K. N., Schuenemann, G. M., Bicalho, R. C., Gilbert, R. O., Rodriguez Zas, S., Seabury, C. M., Rosa, G., & Thatcher, W. W. (2020). Early-lactation diseases and fertility in 2 seasons of calving across US dairy herds. Journal of Dairy Science, 103(11), 10560-10576. https://doi.org/10.3168/jds.2019-17951
Shpigler, H. Y., Herb, B., Drnevich, J., Band, M., Robinson, G. E., & Bloch, G. (2020). Juvenile hormone regulates brain-reproduction tradeoff in bumble bees but not in honey bees. Hormones and Behavior, 126, [104844]. https://doi.org/10.1016/j.yhbeh.2020.104844
Tkachenko, A. V., Maslov, S., Elbanna, A., Wong, G., Weiner, Z., & Goldenfeld, N. (2020). Time-dependent heterogeneity leads to transient suppression of COVID-19 epidemic, not herd immunity. (medRxiv). Cold Spring Harbor Laboratory Press. https://doi.org/10.1101/2020.07.26.20162420
Tkachenko, A. V., Maslov, S., Elbanna, A., Wong, G. N., Weiner, Z. J., & Goldenfeld, N. (2020). Time-dependent heterogeneity leads to transient suppression of COVID-19 epidemic, not herd immunity. Unknown Journal. https://doi.org/10.1101/2020.07.26.20162420
Luro, A. B., Fernández-Juricic, E., Baumhardt, P., & Hauber, M. E. (2020). Visual acuity and egg spatial chromatic contrast predict egg rejection behavior of American robins. The Journal of experimental biology, 223. https://doi.org/10.1242/jeb.229609
Kim, B. S., Kim, M. K., Cho, Y., Hamed, E. E., Gillette, M. U., Cha, H., Miljkovic, N., Aakalu, V. K., Kang, K., Son, K. N., Schachtschneider, K. M., Schook, L. B., Hu, C., Popescu, G., Park, Y., Ballance, W. C., Yu, S., Im, S. G., Lee, J., ... Kong, H. (2020). Electrothermal soft manipulator enabling safe transport and handling of thin cell/tissue sheets and bioelectronic devices. Science Advances, 6(42), [eabc5630]. https://doi.org/10.1126/sciadv.abc5630
Meng, Y., Zhang, Y., Huang, J., Xiong, C., Ji, H., Zhang, C., & Han, J. (2020). Text classification using label names only: A language model self-training approach. Unknown Journal.
Huang, J., Xie, Y., Meng, Y., Zhang, Y., & Han, J. (2020). CoRel: Seed-guided topical taxonomy construction by concept learning and relation transferring. Unknown Journal.
Huang, J., Meng, Y., Guo, F., Ji, H., & Han, J. (2020). Weakly-supervised aspect-based sentiment analysis via joint aspect-sentiment topic embedding. Unknown Journal.
Zhu, W., Zhang, C., Yao, S., Gao, X., & Han, J. (2020). A spherical hidden markov model for semantics-rich human mobility modeling. Unknown Journal.
Smith, B. N., Hannas, M., Orso, C., Martins, S. M. M. K., Wang, M., Donovan, S. M., & Dilger, R. N. (2020). Dietary osteopontin-enriched algal protein as nutritional support in weaned pigs infected with F18-fimbriated enterotoxigenic Escherichia coli. Journal of animal science, 98(10). https://doi.org/10.1093/jas/skaa314
Roca, A. L. (2020). Evolution: Untangling the Woolly Rhino’s Extinction. Current Biology, 30(19), R1087-R1090. https://doi.org/10.1016/j.cub.2020.08.021
Shen, J., Ji, H., & Han, J. (2020). Near-imperceptible neural linguistic steganography via self-adjusting arithmetic coding. Unknown Journal.
Dong, J., Zielinski, R. E., & Hudson, M. E. (2020). t-SNAREs bind the Rhg1 α-SNAP and mediate soybean cyst nematode resistance. Plant Journal, 104(2), 318-331. https://doi.org/10.1111/tpj.14923
Cheraghchi, M., Gabrys, R., Milenkovic, O., & Ribeiro, J. (2020). Coded Trace Reconstruction. IEEE Transactions on Information Theory, 66(10), 6084-6103. [9097932]. https://doi.org/10.1109/TIT.2020.2996377
Shinn, L. M., Li, Y., Mansharamani, A., Auvil, L. S., Welge, M. E., Bushell, C., Khan, N. A., Charron, C. S., Novotny, J. A., Baer, D. J., Zhu, R., & Holscher, H. D. (2020). Fecal Bacteria as Biomarkers for Predicting Food Intake in Healthy Adults. The Journal of nutrition. https://doi.org/10.1093/jn/nxaa285
Mao, Y., Qu, Y., Xie, Y., Ren, X., & Han, J. (2020). Multi-document summarization with maximal marginal relevance-guided reinforcement learning. Unknown Journal.
Shen, J., Qiu, W., Shang, J., Vanni, M., Ren, X., & Han, J. (2020). SynSetExpan: An iterative framework for joint entity set expansion and synonym discovery. Unknown Journal.
Dibaeinia, P., & Sinha, S. (2020). SERGIO: A Single-Cell Expression Simulator Guided by Gene Regulatory Networks. Cell Systems, 11(3), 252-271.e11. https://doi.org/10.1016/j.cels.2020.08.003
Sinha, S., Jones, B. M., Traniello, I. M., Bukhari, S. A., Halfon, M. S., Hofmann, H. A., Huang, S., Katz, P. S., Keagy, J., Lynch, V. J., Sokolowski, M. B., Stubbs, L. J., Tabe-Bordbar, S., Wolfner, M. F., & Robinson, G. E. (2020). Behavior-related gene regulatory networks: A new level of organization in the brain. Proceedings of the National Academy of Sciences of the United States of America, 117(38), 23270-23279. https://doi.org/10.1073/pnas.1921625117
Boyce, W. T., Sokolowski, M. B., & Robinson, G. E. (2020). Genes and environments, development and time. Proceedings of the National Academy of Sciences of the United States of America, 117(38), 23235-23241. https://doi.org/10.1073/pnas.2016710117
Perrin-Stowe, T. I. N., Ishida, Y., Terrill, E. E., Hamlin, B. C., Penfold, L., Cusack, L. M., Novakofski, J., Mateus-Pinilla, N. E., & Roca, A. L. (Accepted/In press). Prion protein gene (PRNP) sequences suggest differing vulnerability to chronic wasting disease for Florida Key deer (Odocoileus virginianus clavium) and Columbian white-tailed deer (O. v. leucurus). The Journal of heredity, [esaa040]. https://doi.org/10.1093/jhered/esaa040
Mao, Y., He, P., Liu, X., Shen, Y., Gao, J., Han, J., & Chen, W. (2020). Generation-augmented retrieval for open-domain question answering. Unknown Journal.
Catchen, J., Amores, A., & Bassham, S. (Accepted/In press). Chromonomer: A Tool Set for Repairing and Enhancing Assembled Genomes Through Integration of Genetic Maps and Conserved Synteny. G3 (Bethesda, Md.). https://doi.org/10.1534/g3.120.401485
Zhu, Q., Xu, Y., Wang, H., Zhang, C., Han, J., & Yang, C. (2020). Transfer learning of graph neural networks with ego-graph information maximization. Unknown Journal.
Schmill, M. P., Cadney, M. D., Thompson, Z., Hiramatsu, L., Albuquerque, R. L., McNamara, M. P., Castro, A. A., Kay, J. C., Buenaventura, D. G., Ramirez, J. L., Rhodes, J. S., & Garland, T. (Accepted/In press). Conditioned Place Preference for Cocaine and Methylphenidate in Female Mice from Lines Selectively Bred for High Voluntary Wheel-Running Behavior. Genes, Brain and Behavior, [e12700]. https://doi.org/10.1111/gbb.12700
Jones, B. M., Rao, V. D., Gernat, T., Jagla, T., Cash-Ahmed, A., Rubin, B. E. R., Comi, T. J., Bhogale, S., Husain, S. S., Blatti, C., Middendorf, M., Sinha, S., Chandrasekaran, S., & Robinson, G. E. (2020). Individual differences in honey bee (Apis mellifera) behavior enabled by plasticity in brain gene regulatory networks. Unknown Journal. https://doi.org/10.1101/2020.09.09.289272
Elbanna, A., Wong, G. N., Weiner, Z. J., Wang, T., Zhang, H., Liu, Z., Tkachenko, A. V., Maslov, S., & Goldenfeld, N. (2020). Entry screening and multi-layer mitigation of COVID-19 cases for a safe university reopening. (medRxiv). Cold Spring Harbor Laboratory Press. https://doi.org/10.1101/2020.08.29.20184473
Elbanna, A., Wong, G. N., Weiner, Z. J., Wang, T., Zhang, H., Liu, Z., Tkachenko, A. V., Maslov, S., & Goldenfeld, N. (2020). Entry screening and multi-layer mitigation of COVID-19 cases for a safe university reopening. Unknown Journal. https://doi.org/10.1101/2020.08.29.20184473
Louder, M. I. M., Schelsky, W., Hoover, J. P., Louder, A. N. A., & Hauber, M. E. (2020). A seasonal shift in offspring sex ratio of the brood parasitic Brown‐headed Cowbird (Molothrus ater). Journal of Avian Biology, 51(9), [JAV12697]. https://doi.org/10.1111/jav.02560
Wen, Y., Chen, J., Li, J., Arif, W., Kalsotra, A., & Irudayaraj, J. (2020). Effect of PFOA on DNA Methylation and Alternative Splicing in Mouse Liver. Toxicology Letters, 329, 38-46. https://doi.org/10.1016/j.toxlet.2020.04.012
Zhou, R. R., Wang, L., & Zhao, S. D. (2020). Estimation and inference for the indirect effect in high-dimensional linear mediation models. Biometrika, 107(3), 573-589. https://doi.org/10.1093/biomet/asaa016
Kim, D., Singh, N., Waldemer-Streyer, R. J., Yoon, M. S., & Chen, J. (2020). Muscle-derived TRAIL negatively regulates myogenic differentiation. Experimental Cell Research, 394(1), [112165]. https://doi.org/10.1016/j.yexcr.2020.112165
Yao, L., Witt, K., Li, H., Rice, J., Salinas, N. R., Martin, R. D., Huerta-Sánchez, E., & Malhi, R. S. (2020). Population genetics of wild Macaca fascicularis with low-coverage shotgun sequencing of museum specimens. American journal of physical anthropology, 173(1), 21-33. https://doi.org/10.1002/ajpa.24099
Bensky, M. K., & Bell, A. M. (2020). Predictors of individual variation in reversal learning performance in three-spined sticklebacks. Animal cognition, 23(5), 925-938. https://doi.org/10.1007/s10071-020-01399-8
Bui, H. X., Hadi, B. A. R., Oliva, R., & Schroeder, N. E. (2020). Beneficial bacterial volatile compounds for the control of root-knot nematode and bacterial leaf blight on rice. Crop Protection, 135, [104792]. https://doi.org/10.1016/j.cropro.2019.04.016
Androwski, R. J., Asad, N., Wood, J. G., Hofer, A., Locke, S., Smith, C. M., Rose, B., & Schroeder, N. E. (2020). Mutually exclusive dendritic arbors in C. elegans neurons share a common architecture and convergent molecular cues. PLoS genetics, 16(9), [1009029]. https://doi.org/10.1371/journal.pgen.1009029
Antonson, N. D., Hauber, M. E., Mommer, B. C., Hoover, J. P., & Schelsky, W. M. (2020). Physiological responses of host parents to rearing an avian brood parasite: An experimental study. Hormones and Behavior, 125, [104812]. https://doi.org/10.1016/j.yhbeh.2020.104812
Zhou, D., Zheng, L., Han, J., & He, J. (2020). A Data-Driven Graph Generative Model for Temporal Interaction Networks. In KDD 2020 - Proceedings of the 26th ACM SIGKDD International Conference on Knowledge Discovery and Data Mining (pp. 401-411). (Proceedings of the ACM SIGKDD International Conference on Knowledge Discovery and Data Mining). Association for Computing Machinery. https://doi.org/10.1145/3394486.3403082
Dong, X. L., He, X., Kan, A., Li, X., Liang, Y., Ma, J., Xu, Y. E., Zhang, C., Zhao, T., Blanco Saldana, G., Deshpande, S., Michetti Manduca, A., Ren, J., Singh, S. P., Xiao, F., Chang, H. S., Karamanolakis, G., Mao, Y., Wang, Y., ... Han, J. (2020). AutoKnow: Self-Driving Knowledge Collection for Products of Thousands of Types. In KDD 2020 - Proceedings of the 26th ACM SIGKDD International Conference on Knowledge Discovery and Data Mining (pp. 2724-2734). (Proceedings of the ACM SIGKDD International Conference on Knowledge Discovery and Data Mining). Association for Computing Machinery. https://doi.org/10.1145/3394486.3403323
Meng, Y., Huang, J., & Han, J. (2020). Embedding-Driven Multi-Dimensional Topic Mining and Text Analysis. In KDD 2020 - Proceedings of the 26th ACM SIGKDD International Conference on Knowledge Discovery and Data Mining (pp. 3573-3574). (Proceedings of the ACM SIGKDD International Conference on Knowledge Discovery and Data Mining). Association for Computing Machinery. https://doi.org/10.1145/3394486.3406483
Meng, Y., Zhang, Y., Huang, J., Zheng, Y., Zhang, C., & Han, J. (2020). Hierarchical Topic Mining via Joint Spherical Tree and Text Embedding. In KDD 2020 - Proceedings of the 26th ACM SIGKDD International Conference on Knowledge Discovery and Data Mining (pp. 1908-1917). (Proceedings of the ACM SIGKDD International Conference on Knowledge Discovery and Data Mining). Association for Computing Machinery. https://doi.org/10.1145/3394486.3403242
Yang, C., Pal, A., Zhai, A., Pancha, N., Han, J., Rosenberg, C., & Leskovec, J. (2020). MultiSage: Empowering GCN with Contextualized Multi-Embeddings on Web-Scale Multipartite Networks. In KDD 2020 - Proceedings of the 26th ACM SIGKDD International Conference on Knowledge Discovery and Data Mining (pp. 2434-2443). (Proceedings of the ACM SIGKDD International Conference on Knowledge Discovery and Data Mining). Association for Computing Machinery. https://doi.org/10.1145/3394486.3403293
Mao, Y., Zhao, T., Kan, A., Zhang, C., Dong, X. L., Faloutsos, C., & Han, J. (2020). Octet: Online Catalog Taxonomy Enrichment with Self-Supervision. In KDD 2020 - Proceedings of the 26th ACM SIGKDD International Conference on Knowledge Discovery and Data Mining (pp. 2247-2257). (Proceedings of the ACM SIGKDD International Conference on Knowledge Discovery and Data Mining). Association for Computing Machinery. https://doi.org/10.1145/3394486.3403274
Park, C., Yang, C., Zhu, Q., Kim, D., Yu, H., & Han, J. (2020). Unsupervised Differentiable Multi-aspect Network Embedding. In KDD 2020 - Proceedings of the 26th ACM SIGKDD International Conference on Knowledge Discovery and Data Mining (pp. 1435-1445). (Proceedings of the ACM SIGKDD International Conference on Knowledge Discovery and Data Mining). Association for Computing Machinery. https://doi.org/10.1145/3394486.3403196
Antonson, N. D., Rubenstein, D. R., Hauber, M. E., & Botero, C. A. (2020). Ecological uncertainty favours the diversification of host use in avian brood parasites. Nature communications, 11(1), [4185]. https://doi.org/10.1038/s41467-020-18038-y
Fleming, S. A., Mudd, A. T., Hauser, J., Yan, J., Metairon, S., Steiner, P., Donovan, S. M., & Dilger, R. N. (2020). Human and Bovine Milk Oligosaccharides Elicit Improved Recognition Memory Concurrent With Alterations in Regional Brain Volumes and Hippocampal mRNA Expression. Frontiers in Neuroscience, 14, [770]. https://doi.org/10.3389/fnins.2020.00770
Keever, M. R., Zhang, P., Bolt, C. R., Antonson, A. M., Rymut, H. E., Caputo, M. P., Houser, A. K., Hernandez, A. G., Southey, B. R., Rund, L. A., Johnson, R. W., & Rodriguez-Zas, S. L. (2020). Lasting and Sex-Dependent Impact of Maternal Immune Activation on Molecular Pathways of the Amygdala. Frontiers in Neuroscience, 14, [774]. https://doi.org/10.3389/fnins.2020.00774
Tkachenko, A. V., Maslov, S., Elbanna, A., Wong, G. N., Weiner, Z. J., & Goldenfeld, N. (2020). Persistent heterogeneity not short-term overdispersion determines herd immunity to COVID-19. Unknown Journal.
Sonam, S., Bangru, S., Perry, K. J., Kalsotra, A., & Henry, J. J. (2020). Single-cell analyses of the corneal epithelium: Unique cell types and gene expression profiles. Unknown Journal. https://doi.org/10.1101/2020.08.06.240036
Mahajan, T., & Dar, R. D. (2020). Internetwork connectivity of molecular networks across species of life. Unknown Journal. https://doi.org/10.1101/2020.08.03.233304
Larsen, R. J., Raine, L. B., Hillman, C. H., Kramer, A. F., Cohen, N. J., & Barbey, A. K. (2020). Body mass and cardiorespiratory fitness are associated with altered brain metabolism. Metabolic Brain Disease, 35(6), 999-1007. https://doi.org/10.1007/s11011-020-00560-z
Moskát, C., Hauber, M. E., Růžičková, J., Marton, A., Bán, M., & Elek, Z. (2020). Female-female aggression and male responses to the two colour morphs of female common cuckoos. Science of Nature, 107(4), [28]. https://doi.org/10.1007/s00114-020-01680-3
Naidu, V. G., Zhang, Y., Lowe, S., Ray, A., Zhu, H., & Li, X. (2020). Temporal progression of Drosophila medulla neuroblasts generates the transcription factor combination to control T1 neuron morphogenesis. Developmental Biology, 464(1), 35-44. https://doi.org/10.1016/j.ydbio.2020.05.005
Wetzel, E., Grijalva, E., Robins, R. W., & Roberts, B. W. (2020). You're still so vain: Changes in narcissism from young adulthood to middle age. Journal of personality and social psychology, 119(2), 479-496. https://doi.org/10.1037/pspp0000266
Dau, H., Xinh, D. T., Kiah, H. M., Luong, T. T., & Milenkovic, O. (2020). Repairing Reed-Solomon codes via subspace polynomials. Unknown Journal.
Zhuang, H., Guo, F., Zhang, C., Liu, L., & Han, J. (2020). Joint Aspect-Sentiment Analysis with Minimal User Guidance. In SIGIR 2020 - Proceedings of the 43rd International ACM SIGIR Conference on Research and Development in Information Retrieval (pp. 1241-1250). (SIGIR 2020 - Proceedings of the 43rd International ACM SIGIR Conference on Research and Development in Information Retrieval). Association for Computing Machinery, Inc. https://doi.org/10.1145/3397271.3401179
Zhang, Y., Meng, Y., Huang, J., Xu, F. F., Wang, X., & Han, J. (2020). Minimally Supervised Categorization of Text with Metadata. In SIGIR 2020 - Proceedings of the 43rd International ACM SIGIR Conference on Research and Development in Information Retrieval (pp. 1231-1240). (SIGIR 2020 - Proceedings of the 43rd International ACM SIGIR Conference on Research and Development in Information Retrieval). Association for Computing Machinery, Inc. https://doi.org/10.1145/3397271.3401168
Yang, C., Zhang, J., Wang, H., Li, B., & Han, J. (2020). Neural Concept Map Generation for Effective Document Classification with Interpretable Structured Summarization. In SIGIR 2020 - Proceedings of the 43rd International ACM SIGIR Conference on Research and Development in Information Retrieval (pp. 1629-1632). (SIGIR 2020 - Proceedings of the 43rd International ACM SIGIR Conference on Research and Development in Information Retrieval). Association for Computing Machinery, Inc. https://doi.org/10.1145/3397271.3401312
Meng, Y., Zhang, Y., Huang, J., Zhang, Y., Zhang, C., & Han, J. (2020). Hierarchical Topic Mining via Joint Spherical Tree and Text Embedding. Unknown Journal.
Westbrook, S. R., Dwyer, M. R., Cortes, L. R., & Gulley, J. M. (2020). Extended access self-administration of methamphetamine is associated with age- and sex-dependent differences in drug taking behavior and recognition memory in rats. Behavioural Brain Research, 390, [112659]. https://doi.org/10.1016/j.bbr.2020.112659
Emad, A., Ray, T., Jensen, T. W., Parat, M., Natrajan, R., Sinha, S., & Ray, P. S. (2020). Superior breast cancer metastasis risk stratification using an epithelial-mesenchymal-amoeboid transition gene signature. Breast Cancer Research, 22(1), [1304]. https://doi.org/10.1186/s13058-020-01304-8
Weiner, Z. J., Wong, G. N., Elbanna, A., Tkachenko, A. V., Maslov, S., & Goldenfeld, N. D. (2020). Projections and early-warning signals of a second wave of the COVID-19 epidemic in Illinois. (medRxiv). Cold Spring Harbor Laboratory Press. https://doi.org/10.1101/2020.07.06.20147868
Weiner, Z. J., Wong, G. N., Elbanna, A., Tkachenko, A. V., Maslov, S., & Goldenfeld, N. (2020). Projections and early-warning signals of a second wave of the COVID-19 epidemic in Illinois. Unknown Journal. https://doi.org/10.1101/2020.07.06.20147868
Jin, D., Yu, Z., He, D., Yang, C., Yu, P. S., & Han, J. (2020). GCN for HIN via Implicit Utilization of Attention and Meta-paths. Unknown Journal.
Avalos, A., Fang, M., Pan, H., Ramirez Lluch, A., Lipka, A. E., Zhao, S. D., Giray, T., Robinson, G. E., Zhang, G., & Hudson, M. E. (2020). Genomic regions influencing aggressive behavior in honey bees are defined by colony allele frequencies. Proceedings of the National Academy of Sciences. https://doi.org/10.1073/pnas.1922927117
Suarez, A. V., Scharf, H. M., Reeve, H. K., & Hauber, M. E. (2020). Signal detection, acceptance thresholds and the evolution of animal recognition systems. Philosophical Transactions of the Royal Society B: Biological Sciences, 375(1802), 20190464. [20190464]. https://doi.org/10.1098/rstb.2019.0464
Hauber, M. E., Scharf, H. M., Reeve, H. K., & Suarez, A. V. (Eds.) (2020). Signal detection theory in recognition systems: from evolving models to experimental tests. Philosophical Transactions of the Royal Society B: Biological Sciences, 375(1802).
Scharf, H. M., Suarez, A. V., Reeve, H. K., & Hauber, M. E. (2020). The evolution of conspecific acceptance threshold models. Philosophical Transactions of the Royal Society B: Biological Sciences, 375(1802), 20190475. [20190475]. https://doi.org/10.1098/rstb.2019.0475
Lu, Y., Singh, A., & Dar, R. D. (2020). "A transient heritable memory regulates HIV reactivation from latency" Unknown Journal. https://doi.org/10.1101/2020.07.02.185215
Wang, Q., Li, M., Wang, X., Parulian, N., Han, G., Ma, J., Tu, J., Lin, Y., Zhang, H., Liu, W., Chauhan, A., Guan, Y., Li, B., Li, R., Song, X., Ji, H., Han, J., Chang, S. F., Pustejovsky, J., ... Onyshkevych, B. (2020). COVID-19 Literature Knowledge Graph Construction and Drug Repurposing Report Generation. Unknown Journal.
Hays, I. R., Ljubicic, I., & Hauber, M. E. (2020). The shape of avian eggs: Assessment of a novel metric for quantifying eggshell conicality. Auk, 137(3). https://doi.org/10.1093/auk/ukaa021
Pinedo, P., Santos, J. E. P., Chebel, R. C., Galvão, K. N., Schuenemann, G. M., Bicalho, R. C., Gilbert, R. O., Rodriguez-Zas, S. L., Seabury, C. M., Rosa, G., & Thatcher, W. (2020). Associations of reproductive indices with fertility outcomes, milk yield, and survival in Holstein cows. Journal of Dairy Science, 103(7), 6647-6660. https://doi.org/10.3168/jds.2019-17867
Bell, A. M. (2020). Individual variation and the challenge hypothesis. Hormones and Behavior, 123, [104549]. https://doi.org/10.1016/j.yhbeh.2019.06.013
Bleidorn, W., Hill, P. L., Back, M. D., Denissen, J. J. A., Hennecke, M., Hopwood, C. J., Jokela, M., Kandler, C., Lucas, R. E., Luhmann, M., Orth, U., Wagner, J., Wrzus, C., Zimmermann, J., & Roberts, B. (2020). Why stop at two opinions? Reply to McCrae (2020). American Psychologist, 75(5), 731-732. https://doi.org/10.1037/amp0000676
Dong, X. L., He, X., Kan, A., Li, X., Liang, Y., Ma, J., Xu, Y. E., Zhang, C., Zhao, T., Saldana, G. B., Deshpande, S., Manduca, A. M., Ren, J., Singh, S. P., Xiao, F., Chang, H. S., Karamanolakis, G., Mao, Y., Wang, Y., ... Han, J. (2020). AutoKnow: Self-driving knowledge collection for products of thousands of types. Unknown Journal.
Mao, Y., Zhao, T., Kan, A., Zhang, C., Dong, X. L., Faloutsos, C., & Han, J. (2020). Octet: Online Catalog Taxonomy Enrichment with Self-Supervision. Unknown Journal.
Behnke, G. D., Zabaloy, M. C., Riggins, C. W., Rodríguez-Zas, S., Huang, L., & Villamil, M. B. (2020). Acidification in corn monocultures favor fungi, ammonia oxidizing bacteria, and nirK-denitrifier groups. Science of the Total Environment, 720, [137514]. https://doi.org/10.1016/j.scitotenv.2020.137514
Park, C., Han, J., & Yu, H. (2020). Deep multiplex graph infomax: Attentive multiplex network embedding using global information. Knowledge-Based Systems, 197, [105861]. https://doi.org/10.1016/j.knosys.2020.105861
Park, C., Yang, C., Zhu, Q., Kim, D., Yu, H., & Han, J. (2020). Unsupervised Differentiable Multi-aspect Network Embedding. Unknown Journal.
Chen, E., Zielinski, C., Deno, J., Singh, R., Bell, A. M., & Hellmann, J. K. (2020). The specificity of sperm-mediated paternal effects in threespined sticklebacks. Unknown Journal. https://doi.org/10.1101/2020.06.04.135152
Wong, G. N., Weiner, Z. J., Tkachenko, A. V., Elbanna, A., Maslov, S., & Goldenfeld, N. (2020). Modeling COVID-19 dynamics in Illinois under non-pharmaceutical interventions. Unknown Journal.
Xiao, J., Wang, L., Dernoncourt, F., Bui, T., Sun, T., & Han, J. (2020). Open-domain question answering with pre-constructed question spaces. Unknown Journal.
Kaufman, C. D., Liu, S. C., Cvetkovic, C., Lee, C. A., Naseri Kouzehgarani, G., Gillette, R., Bashir, R., & Gillette, M. U. (2020). Emergence of functional neuromuscular junctions in an engineered, multicellular spinal cord-muscle bioactuator. Bioengineering, 4(2), [026104]. https://doi.org/10.1063/1.5121440
Abolins-Abols, M., & Hauber, M. E. (2020). Endocrine regulation of egg rejection in an avian brood parasite host: Endocrine regulation of host behaviour. Biology Letters, 16(6), [20200225]. https://doi.org/10.1098/rsbl.2020.0225rsbl20200225
Mahardja, B., Goodman, A., Goodbla, A., Schreier, A. D., Johnston, C., Fuller, R. C., Contreras, D., & McMartin, L. (2020). Introduction of Bluefin Killifish lucania goodei into the Sacramento-San Joaquin Delta. San Francisco Estuary and Watershed Science, 18(2), [3]. https://doi.org/10.15447/sfews.2020v18iss2art3
Abdelzaher, T., Han, J., Hao, Y., Jing, A., Liu, D., Liu, S., Nguyen, H. H., Nicol, D. M., Shao, H., Wang, T., Yao, S., Zhang, Y., Malik, O., Dipple, S., Flamino, J., Buchanan, F., Cohen, S., Korniss, G., & Szymanski, B. K. (2020). Multiscale online media simulation with SocialCube. Computational and Mathematical Organization Theory, 26(2), 145-174. https://doi.org/10.1007/s10588-019-09303-7
Hudson, M., Garrison, N. A., Sterling, R., Caron, N. R., Fox, K., Yracheta, J., Anderson, J., Wilcox, P., Arbour, L., Brown, A., Taualii, M., Kukutai, T., Haring, R., Te Aika, B., Baynam, G. S., Dearden, P. K., Chagné, D., Malhi, R. S., Garba, I., ... Carroll, S. R. (2020). Rights, interests and expectations: Indigenous perspectives on unrestricted access to genomic data. Nature Reviews Genetics, 21(6), 377-384. https://doi.org/10.1038/s41576-020-0228-x
Chee, Y. M., Colbourn, C. J., Dau, H., Gabrys, R., Ling, A. C. H., Lusi, D., & Milenkovic, O. (2020). Access Balancing in Storage Systems by Labeling Partial Steiner Systems. In 2020 IEEE International Symposium on Information Theory, ISIT 2020 - Proceedings (pp. 566-570). [9174154] (IEEE International Symposium on Information Theory - Proceedings; Vol. 2020-June). Institute of Electrical and Electronics Engineers Inc.. https://doi.org/10.1109/ISIT44484.2020.9174154
Lee, C. C., Weng, Y. M., Lai, L. C., Suarez, A. V., Wu, W. J., Lin, C. C., & Yang, C. C. S. (2020). Analysis of recent interception records reveals frequent transport of arboreal ants and potential predictors for ant invasion in Taiwan. Insects, 11(6), 1-13. [356]. https://doi.org/10.3390/insects11060356
Hanisch, P. E., Drager, K., Yang, W. H., Tubaro, P. L., & Suarez, A. V. (2020). Intra- and interspecific variation in trophic ecology of ‘predatory’ ants in the subfamily Ponerinae. Ecological Entomology, 45(3), 444-455. https://doi.org/10.1111/een.12817
Lawson, S. L., Leuschner, N., Gill, B. J., Enos, J. K., & Hauber, M. E. (2020). Loss of graded enemy recognition in a Whitehead population allopatric with brood-parasitic Long-tailed Cuckoos. Avocetta, 44(1), 3-10. https://doi.org/10.30456/AVO.2020104
Gabrys, R., Pattabiraman, S., & Milenkovic, O. (2020). Mass Error-Correction Codes for Polymer-Based Data Storage. In 2020 IEEE International Symposium on Information Theory, ISIT 2020 - Proceedings (pp. 25-30). [9174404] (IEEE International Symposium on Information Theory - Proceedings; Vol. 2020-June). Institute of Electrical and Electronics Engineers Inc.. https://doi.org/10.1109/ISIT44484.2020.9174404
Luro, A. B., Fernández-Juricic, E., Baumhardt, P., & Hauber, M. E. (2020). Visual acuity and egg spatial chromatic contrast predict egg rejection behavior of American robins. Unknown Journal. https://doi.org/10.1101/2020.05.21.109405
Westbrook, S. R., & Gulley, J. M. (2020). Effects of the GluN2B antagonist, Ro 25-6981, on extinction consolidation following adolescent- or adult-onset methamphetamine self-administration in male and female rats. Unknown Journal. https://doi.org/10.1101/2020.05.11.088732
Monestier, C., & Bell, A. M. (2020). Personality traits change after an opportunity to mate. Proceedings of the Royal Society B: Biological Sciences, 287(1926), [20192936]. https://doi.org/10.1098/rspb.2019.2936
Geffre, A. C., Gernat, T., Harwood, G. P., Jones, B. M., Morselli Gysi, D., Hamilton, A. R., Bonning, B. C., Toth, A. L., Robinson, G. E., & Dolezal, A. G. (2020). Honey bee virus causes context-dependent changes in host social behavior. PNAS, 117(19), 10406-10413. https://doi.org/10.1073/pnas.2002268117
Xin, H., & Zhao, S. D. (2020). A nonparametric empirical Bayes approach to covariance matrix estimation. Unknown Journal.
Shpigler, H. Y., Herb, B., Drnevich, J., Band, M. R., Robinson, G. E., & Bloch, G. (2020). The evolution of extreme fertility defied ancestral gonadotropin mediated brain-reproduction tradeoff. Unknown Journal. https://doi.org/10.1101/2020.04.30.070078
Loog, L., Thalmann, O., Sinding, M. H. S., Schuenemann, V. J., Perri, A., Germonpré, M., Bocherens, H., Witt, K. E., Samaniego Castruita, J. A., Velasco, M. S., Lundstrøm, I. K. C., Wales, N., Sonet, G., Frantz, L., Schroeder, H., Budd, J., Jimenez, E. L., Fedorov, S., Gasparyan, B., ... Manica, A. (2020). Ancient DNA suggests modern wolves trace their origin to a Late Pleistocene expansion from Beringia. Molecular ecology, 29(9), 1596-1610. https://doi.org/10.1111/mec.15329
Luro, A. B., & Hauber, M. E. (2020). Avian diet and foraging ecology constrain foreign egg recognition and rejection. Avian Biology Research, 13(1-2), 24-31. https://doi.org/10.1177/1758155920914575
Bleidorn, W., Hopwood, C. J., Back, M. D., Denissen, J. J. A., Hennecke, M., Jokela, M., Kandler, C., Lucas, R. E., Luhmann, M., Orth, U., Roberts, B. W., Wagner, J., Wrzus, C., & Zimmermann, J. (2020). Longitudinal Experience-Wide Association Studies—A Framework for Studying Personality Change. European Journal of Personality, 34(3), 285-300. https://doi.org/10.1002/per.2247
Zhang, Y., Meng, Y., Huang, J., Xu, F. F., Wang, X., & Han, J. (2020). Minimally Supervised Categorization of Text with Metadata. Unknown Journal.
Zhi, S., Liu, L., Zhang, Y., Wang, S., Li, Q., Zhang, C., & Han, J. (2020). Partially-typed NER datasets integration: Connecting practice to theory. Unknown Journal.
Ly, L. K., Rowles, J. L., Paul, H. M., Alves, J. M. P., Yemm, C., Wolf, P. M., Devendran, S., Hudson, M. E., Morris, D. J., Erdman, J. W., & Ridlon, J. M. (2020). Bacterial steroid-17,20-desmolase is a taxonomically rare enzymatic pathway that converts prednisone to 1,4-androstanediene-3,11,17-trione, a metabolite that causes proliferation of prostate cancer cells. Journal of Steroid Biochemistry and Molecular Biology, 199, [105567]. https://doi.org/10.1016/j.jsbmb.2019.105567
Stieger, M., Wepfer, S., Rüegger, D., Kowatsch, T., Roberts, B. W., & Allemand, M. (2020). Becoming More Conscientious or More Open to Experience? Effects of a Two-Week Smartphone-Based Intervention for Personality Change. European Journal of Personality, 34(3), 345-366. https://doi.org/10.1002/per.2267
Larson, E. R., Graham, B. M., Achury, R., Coon, J. J., Daniels, M. K., Gambrell, D. K., Jonasen, K. L., King, G. D., LaRacuente, N., Perrin-Stowe, T. I. N., Reed, E. M., Rice, C. J., Ruzi, S. A., Thairu, M. W., Wilson, J. C., & Suarez, A. V. (2020). From eDNA to citizen science: emerging tools for the early detection of invasive species. Frontiers in Ecology and the Environment, 18(4), 194-202. https://doi.org/10.1002/fee.2162
Pan, C., Hossein Tabatabaei Yazdi, S. M., Kasra Tabatabaei, S., Hernandez, A. G., Schroeder, C., & Milenkovic, O. (2020). Image Processing in DNA. In 2020 IEEE International Conference on Acoustics, Speech, and Signal Processing, ICASSP 2020 - Proceedings (pp. 8831-8835). [9054262] (ICASSP, IEEE International Conference on Acoustics, Speech and Signal Processing - Proceedings; Vol. 2020-May). Institute of Electrical and Electronics Engineers Inc.. https://doi.org/10.1109/ICASSP40776.2020.9054262
Magory Cohen, T., Kumar, R. S., Nair, M., Hauber, M. E., & Dor, R. (2020). Innovation and decreased neophobia drive invasion success in a widespread avian invader. Animal Behaviour, 163, 61-72. https://doi.org/10.1016/j.anbehav.2020.02.012
Li, P., Puleo, G. J., & Milenkovic, O. (2020). Motif and Hypergraph Correlation Clustering. IEEE Transactions on Information Theory, 66(5), 3065-3078. [8830473]. https://doi.org/10.1109/TIT.2019.2940246
Gamage, A., Chien, E., Peng, J., & Milenkovic, O. (2020). Multi-MotifGAN (MMGAN): Motif-Targeted Graph Generation and Prediction. In 2020 IEEE International Conference on Acoustics, Speech, and Signal Processing, ICASSP 2020 - Proceedings (pp. 4182-4186). [9053451] (ICASSP, IEEE International Conference on Acoustics, Speech and Signal Processing - Proceedings; Vol. 2020-May). Institute of Electrical and Electronics Engineers Inc.. https://doi.org/10.1109/ICASSP40776.2020.9053451
DeAngelis, R., Dodd, L., & Rhodes, J. (2020). Nonapeptides mediate trade-offs in parental care strategy. Hormones and Behavior, 121, [104717]. https://doi.org/10.1016/j.yhbeh.2020.104717
Ramalho, M. O., Duplais, C., Orivel, J., Dejean, A., Gibson, J. C., Suarez, A. V., & Moreau, C. S. (2020). Development but not diet alters microbial communities in the Neotropical arboreal trap jaw ant Daceton armigerum: an exploratory study. Scientific reports, 10(1), [7350]. https://doi.org/10.1038/s41598-020-64393-7
Zhang, Y., Shen, J., Shang, J., & Han, J. (2020). Empower entity set expansion via language model probing. Unknown Journal.
Wang, X., Liu, W., Chauhan, A., Guan, Y., & Han, J. (2020). Automatic Textual Evidence Mining in COVID-19 Literature. (arXiv:2004.12563).
Rana, V., Chien, E., Peng, J., & Milenkovic, O. (2020). How fast does the SARS-Cov-2 virus really mutate in heterogeneous populations? Unknown Journal. https://doi.org/10.1101/2020.04.23.20076075
Rana, V., Chien, E., Peng, J., & Milenkovic, O. (2020). Small-sample estimation of the mutational support and the distribution of mutations in the SARS-Cov-2 genome. (medRxiv). Cold Spring Harbor Laboratory Press. https://doi.org/10.1101/2020.04.23.20076075
Wang, X., Liu, W., Chauhan, A., Guan, Y., & Han, J. (2020). Automatic textual evidence mining in COVID-19 literature. Unknown Journal.
Zhu, Q., Wei, H., Sisman, B., Zheng, D., Faloutsos, C., Dong, X. L., & Han, J. (2020). Collective Multi-type Entity Alignment between Knowledge Graphs. In The Web Conference 2020 - Proceedings of the World Wide Web Conference, WWW 2020 (pp. 2241-2252). (The Web Conference 2020 - Proceedings of the World Wide Web Conference, WWW 2020). Association for Computing Machinery, Inc. https://doi.org/10.1145/3366423.3380289
Meng, Y., Huang, J., Wang, G., Wang, Z., Zhang, C., Zhang, Y., & Han, J. (2020). Discriminative Topic Mining via Category-Name Guided Text Embedding. In The Web Conference 2020 - Proceedings of the World Wide Web Conference, WWW 2020 (pp. 2121-2132). (The Web Conference 2020 - Proceedings of the World Wide Web Conference, WWW 2020). Association for Computing Machinery, Inc. https://doi.org/10.1145/3366423.3380278
Gu, X., Mao, Y., Han, J., Liu, J., Wu, Y., Yu, C., Finnie, D., Yu, H., Zhai, J., & Zukoski, N. (2020). Generating Representative Headlines for News Stories. In The Web Conference 2020 - Proceedings of the World Wide Web Conference, WWW 2020 (pp. 1773-1784). (The Web Conference 2020 - Proceedings of the World Wide Web Conference, WWW 2020). Association for Computing Machinery, Inc. https://doi.org/10.1145/3366423.3380247
Huang, J., Xie, Y., Meng, Y., Shen, J., Zhang, Y., & Han, J. (2020). Guiding Corpus-based Set Expansion by Auxiliary Sets Generation and Co-Expansion. In The Web Conference 2020 - Proceedings of the World Wide Web Conference, WWW 2020 (pp. 2188-2198). (The Web Conference 2020 - Proceedings of the World Wide Web Conference, WWW 2020). Association for Computing Machinery, Inc. https://doi.org/10.1145/3366423.3380284
Shang, J., Zhang, X., Liu, L., Li, S., & Han, J. (2020). NetTaxo: Automated Topic Taxonomy Construction from Text-Rich Network. In The Web Conference 2020 - Proceedings of the World Wide Web Conference, WWW 2020 (pp. 1908-1919). (The Web Conference 2020 - Proceedings of the World Wide Web Conference, WWW 2020). Association for Computing Machinery, Inc. https://doi.org/10.1145/3366423.3380259
Shen, J., Shen, Z., Xiong, C., Wang, C., Wang, K., & Han, J. (2020). TaxoExpan: Self-supervised Taxonomy Expansion with Position-Enhanced Graph Neural Network. In The Web Conference 2020 - Proceedings of the World Wide Web Conference, WWW 2020 (pp. 486-497). (The Web Conference 2020 - Proceedings of the World Wide Web Conference, WWW 2020). Association for Computing Machinery, Inc. https://doi.org/10.1145/3366423.3380132
Liu, L., Liu, X., Gao, J., Chen, W., & Han, J. (2020). Understanding the difficulty of training transformers. Unknown Journal.
Chang, H. S., Halder, U., Shih, C. H., Tekinalp, A., Parthasarathy, T., Gribkova, E., Chowdhary, G., Gillette, R., Gazzola, M., & Mehta, P. G. (2020). Energy shaping control of a CyberOctopus soft arm. Unknown Journal.
Srivastava, I., Misra, S. K., Bangru, S., Boateng, K. A., Soares, J. A. N. T., Schwartz-Duval, A. S., Kalsotra, A., & Pan, D. (2020). Complementary Oligonucleotide Conjugated Multicolor Carbon Dots for Intracellular Recognition of Biological Events. ACS Applied Materials and Interfaces, 12(14), 16137-16149. https://doi.org/10.1021/acsami.0c02463
Xue, C., Liu, Z., & Goldenfeld, N. (2020). Scale-invariant topology and bursty branching of evolutionary trees emerge from niche construction. Proceedings of the National Academy of Sciences of the United States of America, 117(14), 7879-7887. https://doi.org/10.1073/pnas.1915088117
Peng, J., Chembazhi, U. V., Bangru, S., Traniello, I. M., Kalsotra, A., Ochoa, I., & Hernaez, M. (2020). SimiC: A Single Cell Gene Regulatory Network Inference method with Similarity Constraints. Unknown Journal. https://doi.org/10.1101/2020.04.03.023002
Flamingh, A., Coutu, A., Roca, A. L., & Malhi, R. S. (2020). Accurate sex identification of ancient elephant and other animal remains using low-coverage DNA shotgun sequencing data. G3: Genes, Genomes, Genetics, 10(4), 1427-1432. https://doi.org/10.1534/g3.119.400833
Hyun, J., Sun, Z., Ahmadi, A. R., Bangru, S., Chembazhi, U. V., Du, K., Chen, T., Tsukamoto, H., Rusyn, I., Kalsotra, A., & Diehl, A. M. (2020). Epithelial splicing regulatory protein 2-mediated alternative splicing reprograms hepatocytes in severe alcoholic hepatitis. Journal of Clinical Investigation, 130(4), 2129-2145. https://doi.org/10.1172/JCI132691
Campbell-Staton, S. C., Winchell, K. M., Rochette, N. C., Fredette, J., Maayan, I., Schweizer, R. M., & Catchen, J. (2020). Parallel selection on thermal physiology facilitates repeated adaptation of city lizards to urban heat islands. Nature Ecology and Evolution, 4(4), 652-658. https://doi.org/10.1038/s41559-020-1131-8
Li, P., He, N., & Milenkovic, O. (2020). Quadratic decomposable submodular function minimization: Theory and practice. Journal of Machine Learning Research, 21.
Bangru, S., & Kalsotra, A. (2020). Cellular and molecular basis of liver regeneration. Seminars in Cell and Developmental Biology, 100, 74-87. https://doi.org/10.1016/j.semcdb.2019.12.004
Fox, D. T., Cohen, E., & Smith-Bolton, R. (2020). Model systems for regeneration: Drosophila. Development (Cambridge), 147(7), [173781]. https://doi.org/10.1242/dev.173781
Hanson, H. E., Mathews, N. S., Hauber, M. E., & Martin, L. B. (2020). The house sparrow in the service of basic and applied biology. eLife, 9, [e52803]. https://doi.org/10.7554/eLife.52803
Yang, C., Xiao, Y., Zhang, Y., Sun, Y., & Han, J. (2020). Heterogeneous network representation learning: Survey, benchmark, evaluation, and beyond. Unknown Journal.
Lawson, S. L., Enos, J. K., Mendes, N. C., Gill, S. A., & Hauber, M. E. (2020). Heterospecific eavesdropping on an anti-parasitic referential alarm call. Communications Biology, 3(1), [143]. https://doi.org/10.1038/s42003-020-0875-7
Wang, X., Song, X., Li, B., Guan, Y., & Han, J. (2020). Comprehensive named entity recognition on CORD-19 with distant or weak supervision. Unknown Journal.
Maslov, S., & Goldenfeld, N. (2020). Window of opportunity for mitigation to prevent overflow of ICU capacity in Chicago by COVID-19. Unknown Journal. https://doi.org/10.1101/2020.03.20.20040048
Maslov, S., & Goldenfeld, N. D. (2020). Window of Opportunity for Mitigation to Prevent Overflow of ICU capacity in Chicago by COVID-19. (medRxiv). Cold Spring Harbor Laboratory Press. https://doi.org/10.1101/2020.03.20.20040048
Misra, C., Bangru, S., Lin, F., Lam, K., Koenig, S. N., Lubbers, E. R., Hedhli, J., Murphy, N. P., Parker, D. J., Dobrucki, L. W., Cooper, T. A., Tajkhorshid, E., Mohler, P. J., & Kalsotra, A. (2020). Aberrant Expression of a Non-muscle RBFOX2 Isoform Triggers Cardiac Conduction Defects in Myotonic Dystrophy. Developmental cell, 52(6), 748-763.e6. https://doi.org/10.1016/j.devcel.2020.01.037
Pietro, V. D., Yakoub, K. M., Caruso, G., Lazzarino, G., Signoretti, S., Barbey, A. K., Tavazzi, B., Lazzarino, G., Belli, A., & Amorini, A. M. (2020). Antioxidant Therapies in Traumatic Brain Injury. Antioxidants, 9(3), [260]. https://doi.org/10.3390/antiox9030260
Maslov, S., & Goldenfeld, N. (2020). Window of opportunity for mitigation to prevent overflow of icu capacity in chicago by covid-19. Unknown Journal.
Zhang, P., Southey, B. R., & Rodriguez-Zas, S. L. (2020). Co-expression networks uncover regulation of splicing and transcription markers of disease. EPiC Series in Computing, 70, 119-128. https://doi.org/10.29007/rl4h
Louder, M. I. M., Lafayette, M., Louder, A. A., Uy, F. M. K., Balakrishnan, C. N., Yasukawa, K., & Hauber, M. E. (2020). Shared transcriptional responses to con- and heterospecific behavioral antagonists in a wild songbird. Scientific reports, 10(1), [4092]. https://doi.org/10.1038/s41598-020-60231-y
Munroe, M., Mahmassani, Z. S., Dvoretskiy, S., Reid, J. J., Miller, B. F., Hamilton, K., Rhodes, J. S., & Boppart, M. D. (2020). Cognitive function is preserved in aged mice following long-term β-hydroxy β-methylbutyrate supplementation. Nutritional Neuroscience, 23(3), 170-182. https://doi.org/10.1080/1028415X.2018.1483101
James, N., & Bell, A. (2020). Minimally invasive brain injections for viral-mediated transgenesis: New tools for behavioral genetics in sticklebacks. Unknown Journal. https://doi.org/10.1101/2020.03.02.973594
Pattabiraman, S., Gabrys, R., & Milenkovic, O. (2020). Coding for Polymer-Based Data Storage. Unknown Journal.
Ismar-Rebitz, S. M. H., Daniel, C., Stephenson, B. M., Raubenheimer, D., Millar, C. D., & Hauber, M. E. (2020). El arribo temprano a la colonia de anidación en un ave marina tiene beneficios reproductivos específicos a sexo. Wilson Journal of Ornithology, 132(1), 29-38. https://doi.org/10.1676/1559-4491-132.1.29
Moran, R. L., Catchen, J. M., & Fuller, R. C. (2020). Genomic resources for darters (Percidae: Etheostominae) provide insight into postzygotic barriers implicated in speciation. Molecular biology and evolution, 37(3), 711-729. [msz260]. https://doi.org/10.1093/molbev/msz260
Chioneso, N. A., Hunter, C. D., Gobin, R. L., McNeil Smith, S., Mendenhall, R., & Neville, H. A. (2020). Community Healing and Resistance Through Storytelling: A Framework to Address Racial Trauma in Africana Communities. Journal of Black Psychology, 46(2-3), 95-121. https://doi.org/10.1177/0095798420929468
Posner, M. I., & Barbey, A. K. (2020). General intelligence in the age of neuroimaging. Trends in Neuroscience and Education, 18, [100126]. https://doi.org/10.1016/j.tine.2020.100126
Khajouei, F., Samper, N., Djabrayan, N. J., Lunt, B., Jiménez, G., & Sinha, S. (2020). Model-based analysis of polymorphisms in an enhancer reveals cis-regulatory mechanisms. Unknown Journal. https://doi.org/10.1101/2020.02.07.939264
Catchen, J., Amores, A., & Bassham, S. (2020). Chromonomer: A tool set for repairing and enhancing assembled genomes through integration of genetic maps and conserved synteny. Unknown Journal. https://doi.org/10.1101/2020.02.04.934711
Huang, S., Blatti, C., Sinha, S., & Parameswaran, A. G. (2020). GENVISAGE: Rapid identification of discriminative and explainable feature pairs for genomic analysis. Unknown Journal. https://doi.org/10.1101/2020.02.05.935411
Ngumbi, E. N., Hanks, L. M., Suarez, A. V., Millar, J. G., & Berenbaum, M. R. (2020). Author Correction: Factors Associated with Variation in Cuticular Hydrocarbon Profiles in the Navel Orangeworm, Amyelois transitella (Lepidoptera: Pyralidae) (Journal of Chemical Ecology, (2020), 46, 1, (40-47), 10.1007/s10886-019-01129-6). Journal of Chemical Ecology, 46(2), 232. https://doi.org/10.1007/s10886-020-01155-9
Manna, T. J., Hanley, D., Honza, M., Capek, M., Rutila, J., Samaš, P., Abolins-Abols, M., & Hauber, M. E. (2020). Fitting different visual models to behavioral patterns of parasitic egg rejection along a natural egg color gradient in a cavity-nesting host species. Vision Research, 167, 54-59. https://doi.org/10.1016/j.visres.2019.12.007
Donelan, S. C., Hellmann, J. K., Bell, A. M., Luttbeg, B., Orrock, J. L., Sheriff, M. J., & Sih, A. (2020). Transgenerational Plasticity in Human-Altered Environments. Trends in Ecology and Evolution, 35(2), 115-124. https://doi.org/10.1016/j.tree.2019.09.003
Fischer, E. K., Alvarez, H., Lagerstrom, K. M., Petrillo, R., Ellis, G., & O'Connell, L. A. (2020). Neural correlates of winning and losing fights in poison frog tadpoles. Unknown Journal. https://doi.org/10.1101/2020.01.27.922286
Huang, J., Xie, Y., Meng, Y., Shen, J., Zhang, Y., & Han, J. (2020). Guiding corpus-based set expansion by auxiliary sets generation and co-expansion. Unknown Journal.
Shen, J., Shen, Z., Xiong, C., Wang, C., Wang, K., & Han, J. (2020). TaxoExpan: Self-supervised taxonomy expansion with position-enhanced graph neural network. Unknown Journal.
Gu, X., Mao, Y., Han, J., Liu, J., Yu, H., Wu, Y., Yu, C., Finnie, D., Zhai, J., & Zukoski, N. (2020). Generating representative headlines for news stories. Unknown Journal.
Kenny, P. J., Kim, M., Skariah, G., Nielsen, J., Lannom, M. C., & Ceman, S. (2020). The FMRP-MOV10 complex: A translational regulatory switch modulated by G-Quadruplexes. Nucleic acids research, 48(2), 862-878. https://doi.org/10.1093/nar/gkz1092
Rahimi, N., Carmon, S., Averbukh, I., Khajouei, F., Sinha, S., Schejter, E. D., Barkai, N., & Shilo, B. Z. (2020). Global shape of Toll activation is determined by wntD enhancer properties. Proceedings of the National Academy of Sciences of the United States of America, 117(3), 1552-1558. https://doi.org/10.1073/pnas.1918268117
Sankar, A., Zhang, X., Krishnan, A., & Han, J. (2020). InF-VAE: A variational autoencoder framework to integrate homophily and influence in diffusion prediction. In WSDM 2020 - Proceedings of the 13th International Conference on Web Search and Data Mining (pp. 510-518). (WSDM 2020 - Proceedings of the 13th International Conference on Web Search and Data Mining). Association for Computing Machinery, Inc. https://doi.org/10.1145/3336191.3371811
Yang, C., Zhang, J., Wang, H., Li, S., Kim, M., Walker, M., Xiao, Y., & Han, J. (2020). Relation learning on social networks with multi-modal graph edge variational autoencoders. In WSDM 2020 - Proceedings of the 13th International Conference on Web Search and Data Mining (pp. 699-707). (WSDM 2020 - Proceedings of the 13th International Conference on Web Search and Data Mining). Association for Computing Machinery, Inc. https://doi.org/10.1145/3336191.3371829
Yang, C., Liu, M., He, F., Peng, J., & Han, J. (2020). cube2net: Efficient query-specific network construction with data cube organization. Unknown Journal.
Gabrys, R., Pattabiraman, S., & Milenkovic, O. (2020). Mass Error-Correction Codes for Polymer-Based Data Storage. Unknown Journal.
Agarwal, A., Milenkovic, O., Pattabiraman, S., & Ribeiro, J. (2020). Group testing with runlength constraints for topological molecular storage. Unknown Journal.
Minuti, A., Bionaz, M., Lopreiato, V., Janovick, N. A., Rodriguez-Zas, S. L., Drackley, J. K., & Loor, J. J. (2020). Prepartum dietary energy intake alters adipose tissue transcriptome profiles during the periparturient period in Holstein dairy cows. Journal of Animal Science and Biotechnology, 11(1), [1]. https://doi.org/10.1186/s40104-019-0409-7
Miao, R., Badger, T. C., Groesch, K., Diaz-Sylvester, P. L., Wilson, T., Ghareeb, A., Martin, J. A., Cregger, M., Welge, M., Bushell, C., Auvil, L., Zhu, R., Brard, L., & Braundmeier-Fleming, A. (2020). Assessment of peritoneal microbial features and tumor marker levels as potential diagnostic tools for ovarian cancer. PloS one, 15(1), [e0227707]. https://doi.org/10.1371/journal.pone.0227707
Ishida, Y., Tian, T., Brandt, A. L., Kelly, A. C., Shelton, P., Roca, A. L., Novakofski, J., & Mateus-Pinilla, N. E. (2020). Association of chronic wasting disease susceptibility with prion protein variation in white-tailed deer (Odocoileus virginianus). Prion, 14(1), 214-225. https://doi.org/10.1080/19336896.2020.1805288
Naseri Kouzehgarani, G., Bothwell, M. Y., & Gillette, M. U. (2020). Circadian rhythm of redox state regulates membrane excitability in hippocampal CA1 neurons. European Journal of Neuroscience, 51(1), 34-46. https://doi.org/10.1111/ejn.14334
Tanprasertsuk, J., Ferland, G., Johnson, M. A., Poon, L. W., Scott, T. M., Barbey, A. K., Barger, K., Wang, X. D., & Johnson, E. J. (2020). Concentrations of Circulating Phylloquinone, but Not Cerebral Menaquinone-4, Are Positively Correlated with a Wide Range of Cognitive Measures: Exploratory Findings in Centenarians. Journal of Nutrition, 150(1), 82-90. https://doi.org/10.1093/jn/nxz200
Ngumbi, E. N., Hanks, L. M., Suarez, A. V., Millar, J. G., & Berenbaum, M. R. (2020). Factors Associated with Variation in Cuticular Hydrocarbon Profiles in the Navel Orangeworm, Amyelois transitella (Lepidoptera: Pyralidae). Journal of Chemical Ecology, 46(1), 40-47. https://doi.org/10.1007/s10886-019-01129-6
Kim, E. C., Patel, J., Zhang, J., Soh, H., Rhodes, J. S., Tzingounis, A. V., & Chung, H. J. (2020). Heterozygous loss of epilepsy gene KCNQ2 alters social, repetitive and exploratory behaviors. Genes, Brain and Behavior, 19(1), [e12599]. https://doi.org/10.1111/gbb.12599
Rosenfeld, C. S., Hekman, J. P., Johnson, J. L., Lyu, Z., Ortega, M. T., Joshi, T., Mao, J., Vladimirova, A. V., Gulevich, R. G., Kharlamova, A. V., Acland, G. M., Hecht, E. E., Wang, X., Clark, A. G., Trut, L. N., Behura, S. K., & Kukekova, A. V. (2020). Hypothalamic transcriptome of tame and aggressive silver foxes (Vulpes vulpes) identifies gene expression differences shared across brain regions. Genes, Brain and Behavior, 19(1), [e12614]. https://doi.org/10.1111/gbb.12614
Shang, J., Liu, L., Gu, X., Ren, X., Ren, T., & Han, J. (2020). Learning named entity tagger using domain-specific dictionary. In E. Riloff, D. Chiang, J. Hockenmaier, & J. Tsujii (Eds.), Proceedings of the 2018 Conference on Empirical Methods in Natural Language Processing, EMNLP 2018 (pp. 2054-2064). (Proceedings of the 2018 Conference on Empirical Methods in Natural Language Processing, EMNLP 2018). Association for Computational Linguistics.
Miraeiz, E., Chaiprom, U., Afsharifar, A., Karegar, A., Drnevich, J. M., & E Hudson, M. (2020). Early transcriptional responses to soybean cyst nematode HG Type 0 show genetic differences among resistant and susceptible soybeans. TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 133(1), 87-102. https://doi.org/10.1007/s00122-019-03442-w
Rutledge, S., Carr, D. E., Hauber, M. E., & Hanley, D. (Accepted/In press). Best of a bad job or masters of illusion: Do nest light conditions make the eggs of brood parasitic brown-headed cowbirds (Molothrus ater) more similar to the eggs of their hosts? Ethology. https://doi.org/10.1111/eth.13109
Southey, B. R., Rodriguez-Zas, S. L., Rhodes, J. S., & Sweedler, J. V. (2020). Characterization of the prohormone complement in Amphiprion and related fish species integrating genome and transcriptome assemblies. PloS one, 15(3), [e0228562]. https://doi.org/10.1371/journal.pone.0228562
Park, J., Chaney, E., You, S., Abdelrahman, A. M., Leiting, J. L., Yonkus, J. A., Groves, P. D., Harrington, J. J., Spillman, D. R., Lynch, I. T., Marjanovic, M., Tu, H., Bushell, C. B., Nelson, H., Truty, M. J., & Boppart, S. A. (2020). Characterizing treatment response of pancreatic tumor patient-derived xenografts in mice by Simultaneous Label-Free Autofluorescence Multi-Harmonic (SLAM) microscopy. In Clinical and Translational Biophotonics, Translational 2020 (Optics InfoBase Conference Papers; Vol. Part F178-Translational-2020). OSA - The Optical Society.
Wang, Z., Shang, J., Liu, L., Lu, L., Liu, J., & Han, J. (2020). CrossWeigh: Training named entity tagger from imperfect annotations. In EMNLP-IJCNLP 2019 - 2019 Conference on Empirical Methods in Natural Language Processing and 9th International Joint Conference on Natural Language Processing, Proceedings of the Conference (pp. 5154-5163). (EMNLP-IJCNLP 2019 - 2019 Conference on Empirical Methods in Natural Language Processing and 9th International Joint Conference on Natural Language Processing, Proceedings of the Conference). Association for Computational Linguistics.
Fleming, S. A., Mudd, A. T., Hauser, J., Yan, J., Metairon, S., Steiner, P., Donovan, S. M., & Dilger, R. N. (2020). Dietary Oligofructose Alone or in Combination with 2′-Fucosyllactose Differentially Improves Recognition Memory and Hippocampal mRNA Expression. Nutrients, 12(7), [2131]. https://doi.org/10.3390/nu12072131
Novčič, I., Krunić, S., Stanković, D., & Hauber, M. E. (Accepted/In press). Duration of ‘peeks’ in ducks: how much time do Common Pochards Aythya ferina spend with an eye open while in a sleeping posture? Bird Study. https://doi.org/10.1080/00063657.2020.1808590
Ye, D., Gibson, J. C., & Suarez, A. V. (2020). Effects of Abdominal Rotation on Jump Performance in the Ant Gigantiops destructor (Hymenoptera, Formicidae). Integrative Organismal Biology, 2(1), [obz033]. https://doi.org/10.1093/iob/obz033
Liu, L., Ren, X., Shang, J., Gu, X., Peng, J., & Han, J. (2020). Efficient contextualized representation: Language model pruning for sequence labeling. In E. Riloff, D. Chiang, J. Hockenmaier, & J. Tsujii (Eds.), Proceedings of the 2018 Conference on Empirical Methods in Natural Language Processing, EMNLP 2018 (pp. 1215-1225). (Proceedings of the 2018 Conference on Empirical Methods in Natural Language Processing, EMNLP 2018). Association for Computational Linguistics.
Greenlee, A., Kramer, K., Andrade, F., Bellisle, D., Blanks, R., & Mendenhall, R. (Accepted/In press). Financial Instability in the Earned Income Tax Credit Program: Can Advanced Periodic Payments Ameliorate Systemic Stressors? Urban Affairs Review. https://doi.org/10.1177/1078087420921527
Berdan, E. L., Fuller, R. C., & Kozak, G. M. (Accepted/In press). Genomic landscape of reproductive isolation in Lucania killifish: The role of sex loci and salinity. Journal of Evolutionary Biology. https://doi.org/10.1111/jeb.13725
Yang, C., Xiao, Y., Zhang, Y., Sun, Y., & Han, J. (Accepted/In press). Heterogeneous Network Representation Learning: A Unified Framework with Survey and Benchmark. IEEE Transactions on Knowledge and Data Engineering. https://doi.org/10.1109/TKDE.2020.3045924
Mao, Y., Tian, J., Han, J., & Ren, X. (2020). Hierarchical text classification with reinforced label assignment. In EMNLP-IJCNLP 2019 - 2019 Conference on Empirical Methods in Natural Language Processing and 9th International Joint Conference on Natural Language Processing, Proceedings of the Conference (pp. 445-455). (EMNLP-IJCNLP 2019 - 2019 Conference on Empirical Methods in Natural Language Processing and 9th International Joint Conference on Natural Language Processing, Proceedings of the Conference). Association for Computational Linguistics.
Blatti, C., Emad, A., Berry, M. J., Gatzke, L., Epstein, M., Lanier, D., Rizal, P., Ge, J., Liao, X., Sobh, O., Lambert, M., Post, C. S., Xiao, J., Groves, P., Epstein, A. T., Chen, X., Srinivasan, S., Lehnert, E., Kalari, K. R., ... Sinha, S. (2020). Knowledge-guided analysis of "omics" data using the KnowEnG cloud platform. PLoS biology, 18(1), [e3000583]. https://doi.org/10.1371/journal.pbio.3000583
Park, J., Wang, X., Zhao, J., & Han, H. S. (2020). Nanocrystal Precursor Incorporating Separated Reaction Mechanisms for Nucleation and Growth to Unleash the Potential of Heat-up Synthesis. ACS Nano, 14(9), 11579-11593.
HAUBER, MARK. E. (2020). Natural and Artificial Scents Do Not Increase Egg Rejection Rates of Model Brood Parasitic Eggs by American Robins (Turdus Migratorius). Acta Zoologica Academiae Scientiarum Hungaricae, 66(4), 309-317. https://doi.org/10.17109/AZH.66.4.309.2020
Zhao, S. D., & Nguyen, Y. T. (2020). Nonparametric false discovery rate control for identifying simultaneous signals. Electronic Journal of Statistics, 14(1), 110-142. https://doi.org/10.1214/19-EJS1663
Abolins-Abols, M., & Hauber, M. E. (Accepted/In press). Proximate Predictors of Variation in Egg Rejection Behavior by Hosts of Avian Brood Parasites. Journal of Comparative Psychology. https://doi.org/10.1037/com0000225
Cowell, T. W., Valera, E., Jankelow, A., Park, J., Schrader, A. W., Ding, R., Berger, J., Bashir, R., & Han, H. S. (2020). Rapid, Multiplexed Electrical Detection of Biomolecules using Electrically Distinct Hydrogel Beads. Lab on a Chip, 20, 2274-2283.
Lin, Y., Liu, L., Ji, H., Yu, D., & Han, J. (2020). Reliability-aware dynamic feature composition for name tagging. In ACL 2019 - 57th Annual Meeting of the Association for Computational Linguistics, Proceedings of the Conference (pp. 165-174). (ACL 2019 - 57th Annual Meeting of the Association for Computational Linguistics, Proceedings of the Conference). Association for Computational Linguistics (ACL).
Gabrys, R., Dau, H. S., Colbourn, C. J., & Milenkovic, O. (2020). Set-codes with small intersections and small discrepancies. SIAM Journal on Discrete Mathematics, 34(2), 1148-1171. https://doi.org/10.1137/19M1241106
Rivera-Colón, A. G., Rochette, N. C., & Catchen, J. M. (Accepted/In press). Simulation with RADinitio improves RADseq experimental design and sheds light on sources of missing data. Molecular ecology resources. https://doi.org/10.1111/1755-0998.13163
Atherton, O. E., Grijalva, E., Roberts, B. W., & Robins, R. W. (Accepted/In press). Stability and Change in Personality Traits and Major Life Goals From College to Midlife. Personality and social psychology bulletin. https://doi.org/10.1177/0146167220949362
Soto, C. J., Napolitano, C. M., & Roberts, B. W. (Accepted/In press). Taking Skills Seriously: Toward an Integrative Model and Agenda for Social, Emotional, and Behavioral Skills. Current Directions in Psychological Science. https://doi.org/10.1177/0963721420978613
Huang, E. W., Bhope, A., Lim, J., Sinha, S., & Emad, A. (2020). Tissue-guided LASSO for prediction of clinical drug response using preclinical samples. PLoS computational biology, 16(1), [e1007607]. https://doi.org/10.1371/journal.pcbi.1007607
Shi, Y., He, X., Zhang, N., Yang, C., & Han, J. (2020). User-Guided Clustering in Heterogeneous Information Networks via Motif-Based Comprehensive Transcription. In U. Brefeld, E. Fromont, A. Hotho, A. Knobbe, M. Maathuis, & C. Robardet (Eds.), Machine Learning and Knowledge Discovery in Databases - European Conference, ECML PKDD 2019, Proceedings (pp. 361-377). (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); Vol. 11906 LNAI). Springer. https://doi.org/10.1007/978-3-030-46150-8_22
Hauber, M. E., Taylor, D. M., & Brawn, J. D. (Accepted/In press). Variable or atypical? Comparing unusual songs of the Tufted Titmouse with a citizen-science database. Journal of Ornithology. https://doi.org/10.1007/s10336-020-01839-9
Maclaine, K. D., Stebbings, K. A., Llano, D. A., & Rhodes, J. S. (2020). Voluntary wheel running has no impact on brain and liver mitochondrial DNA copy number or mutation measures in the PolG mouse model of aging. PloS one, 15(3), [e0226860]. https://doi.org/10.1371/journal.pone.0226860
Xie, Y., Li, S., Yang, C., Wong, R. C. W., & Han, J. (2020). When do GNNs work: Understanding and improving neighborhood aggregation. In C. Bessiere (Ed.), Proceedings of the 29th International Joint Conference on Artificial Intelligence, IJCAI 2020 (pp. 1303-1309). (IJCAI International Joint Conference on Artificial Intelligence; Vol. 2021-January). International Joint Conferences on Artificial Intelligence.
Louder, M. I. M., Balakrishnan, C. N., Louder, A. A. N., Driver, R. J., London, S. E., & Hauber, M. E. (2019). An Acoustic Password Enhances Auditory Learning in Juvenile Brood Parasitic Cowbirds. Current Biology, 29(23), 4045-4051.e3. https://doi.org/10.1016/j.cub.2019.09.046
Liu, K., Pan, C., Kuhn, A., Nievergelt, A. P., Fantner, G. E., Milenkovic, O., & Radenovic, A. (2019). Detecting topological variations of DNA at single-molecule level. Nature communications, 10(1), [3]. https://doi.org/10.1038/s41467-018-07924-1
Kandel, M. E., Hu, C., Naseri Kouzehgarani, G., Min, E., Sullivan, K. M., Kong, H., ... Popescu, G. (2019). Epi-illumination gradient light interference microscopy for imaging opaque structures. Nature communications, 10(1), [4691]. https://doi.org/10.1038/s41467-019-12634-3
Withers, S., Armstrong, D., Ward-Smith, T., Parsons, S., & Hauber, M. E. (2019). Improved methods for reducing translocation mortality and obtaining reliable population projections for reintroduction of the New Zealand Rifleman Acanthisitta chloris. Bird Conservation International, 29(4), 542-557. https://doi.org/10.1017/S0959270918000412
Bukhari, S. A., Saul, M. C., James, N., Bensky, M. K., Stein, L. R., Trapp, R., & Bell, A. M. (2019). Neurogenomic insights into paternal care and its relation to territorial aggression. Nature communications, 10(1), [4437]. https://doi.org/10.1038/s41467-019-12212-7
Zhang, P., Moye, L. S., Southey, B. R., Dripps, I., Sweedler, J. V., Pradhan, A., & Rodriguez-Zas, S. L. (2019). Opioid-Induced Hyperalgesia Is Associated with Dysregulation of Circadian Rhythm and Adaptive Immune Pathways in the Mouse Trigeminal Ganglia and Nucleus Accumbens. Molecular Neurobiology, 56(12), 7929-7949. https://doi.org/10.1007/s12035-019-01650-5
Taneja, I., Reddy, B., Damhorst, G., Zhao, S. D., Hassan, U., Price, Z., ... Zhu, R. (2019). Publisher Correction: Combining Biomarkers with EMR Data to Identify Patients in Different Phases of Sepsis (Scientific Reports, (2017), 7, 1, (10800), 10.1038/s41598-017-09766-1). Scientific reports, 9(1), [17419]. https://doi.org/10.1038/s41598-019-53691-4
Turner, B. O., Santander, T., Paul, E. J., Barbey, A. K., & Miller, M. B. (2019). Reply to: fMRI replicability depends upon sufficient individual-level data. Communications Biology, 2(1), [129]. https://doi.org/10.1038/s42003-019-0379-5
Nagy, J., Hauber, M. E., Hartley, I. R., & Mainwaring, M. C. (2019). Correlated evolution of nest and egg characteristics in birds. Animal Behaviour, 158, 211-225. https://doi.org/10.1016/j.anbehav.2019.10.015
Andrade, F. C. D., Kramer, K. Z., Greenlee, A., Williams, A. N., & Mendenhall, R. (2019). Impact of the Chicago Earned Income Tax Periodic Payment intervention on food security. Preventive Medicine Reports, 16, [100993]. https://doi.org/10.1016/j.pmedr.2019.100993
You, S., Barkalifa, R., Chaney, E. J., Tu, H., Park, J., Sorrells, J. E., ... Boppart, S. A. (2019). Label-free visualization and characterization of extracellular vesicles in breast cancer. Proceedings of the National Academy of Sciences of the United States of America, 116(48), 24012-24018. https://doi.org/10.1073/pnas.1909243116
Mitrano, M., Lee, S., Husain, A. A., Zhu, M., Munoz, G. D. L. P., Sun, S. X. L., ... Abbamonte, P. (2019). Evidence for photoinduced sliding of the charge-order condensate in La1.875Ba0.125CuO4. Physical Review B, 100(20), [205125]. https://doi.org/10.1103/PhysRevB.100.205125
Huang, L., Riggins, C. W., Rodríguez-Zas, S., Zabaloy, M. C., & Villamil, M. B. (2019). Long-term N fertilization imbalances potential N acquisition and transformations by soil microbes. Science of the Total Environment, 691, 562-571. https://doi.org/10.1016/j.scitotenv.2019.07.154
HamediRad, M., Chao, R., Weisberg, S., Lian, J., Sinha, S., & Zhao, H. (2019). Towards a fully automated algorithm driven platform for biosystems design. Nature communications, 10(1), [5150]. https://doi.org/10.1038/s41467-019-13189-z
Heldenbrand, J. R., Baheti, S., Bockol, M. A., Drucker, T. M., Hart, S. N., Hudson, M. E., ... Mainzer, L. S. (2019). Recommendations for performance optimizations when using GATK3.8 and GATK4. BMC bioinformatics, 20(1), [557]. https://doi.org/10.1186/s12859-019-3169-7
Moran, R. L., Catchen, J. M., & Fuller, R. C. (Accepted/In press). Genomic resources for darters (Percidae: Etheostominae) provide insight into postzygotic barriers implicated in speciation. Molecular biology and evolution, [msz260]. https://doi.org/10.1093/molbev/msz260
Shi, Y., Shen, J., Li, Y., Zhang, N., He, X., Lou, Z., ... Han, J. (2019). Discovering hypernymy in text-rich heterogeneous information network by exploiting context granularity. In CIKM 2019 - Proceedings of the 28th ACM International Conference on Information and Knowledge Management (pp. 599-608). (International Conference on Information and Knowledge Management, Proceedings). Association for Computing Machinery. https://doi.org/10.1145/3357384.3357866
Yang, C., Gan, L., Wang, Z., Shen, J., Xiao, J., & Han, J. (2019). Query-specific knowledge summarization with entity evolutionary networks. In CIKM 2019 - Proceedings of the 28th ACM International Conference on Information and Knowledge Management (pp. 2121-2124). (International Conference on Information and Knowledge Management, Proceedings). Association for Computing Machinery. https://doi.org/10.1145/3357384.3358068
Park, C., Kim, D., Zhu, Q., Han, J., & Yu, H. (2019). Task-guided pair embedding in heterogeneous network. In CIKM 2019 - Proceedings of the 28th ACM International Conference on Information and Knowledge Management (pp. 489-498). (International Conference on Information and Knowledge Management, Proceedings). Association for Computing Machinery. https://doi.org/10.1145/3357384.3357982
Weisner, P. A., Chen, C. Y., Sun, Y., Yoo, J., Kao, W. C., Zhang, H., ... Stubbs, L. (2019). A mouse mutation that dysregulates neighboring GALNT17 and AUTS2 genes is associated with phenotypes related to the human AUTS2 syndrome. G3: Genes, Genomes, Genetics, 9(11), 3891-3906. https://doi.org/10.1534/g3.119.400723
Weis, K. E., & Raetzman, L. T. (2019). Genistein inhibits proliferation and induces senescence in neonatal mouse pituitary gland explant cultures. Toxicology, 427, [152306]. https://doi.org/10.1016/j.tox.2019.152306
Louder, M. I. M., Hauber, M. E., Louder, A. N. A., Hoover, J. P., & Schelsky, W. M. (2019). Greater opportunities for sexual selection in male than in female obligate brood parasitic birds. Journal of Evolutionary Biology, 32(11), 1310-1315. https://doi.org/10.1111/jeb.13537
Novak, T. E., Rodriguez-Zas, S. L., Southey, B. R., Starkey, J. D., Stockler, R. M., Alfaro, G. F., & Moisá, S. J. (2019). Jersey steer ruminal papillae histology and nutrigenomics with diet changes. Journal of Animal Physiology and Animal Nutrition, 103(6), 1694-1707. https://doi.org/10.1111/jpn.13189
Rochette, N. C., Rivera-Colón, A. G., & Catchen, J. M. (2019). Stacks 2: Analytical methods for paired-end sequencing improve RADseq-based population genomics. Molecular ecology, 28(21), 4737-4754. https://doi.org/10.1111/mec.15253
Hauber, M. E., Dainson, M., Luro, A., Louder, A. A., & Hanley, D. (2019). When are egg-rejection cues perceived? A test using thermochromic eggs in an avian brood parasite host. Animal cognition, 22(6), 1141-1148. https://doi.org/10.1007/s10071-019-01306-w
Chatterjee, P., & Goldenfeld, N. (2019). Three-body interactions drive the transition to polar order in a simple flocking model. Physical Review E, 100(4), [040602]. https://doi.org/10.1103/PhysRevE.100.040602
Rudolph, U., & Moss, S. J. (2019). Modulating anxiety and activity. Science, 366(6462), 185-186. https://doi.org/10.1126/science.aaz3176
Brown, N. M., Mendenhall, R., Black, M., Moer, M. V., Flynn, K., McKee, M., ... Zhai, C. X. (2019). In Search of Zora/When Metadata Isn’t Enough: Rescuing the Experiences of Black Women Through Statistical Modeling. Journal of Library Metadata, 19(3-4), 141-162. https://doi.org/10.1080/19386389.2019.1652967
Román, F. J., Colom, R., Hillman, C. H., Kramer, A. F., Cohen, N. J., & Barbey, A. K. (2019). Cognitive and neural architecture of decision making competence. NeuroImage, 199, 172-183. https://doi.org/10.1016/j.neuroimage.2019.05.076
Louder, M. I. M., Lawson, S., Lynch, K. S., Balakrishnan, C. N., & Hauber, M. E. (2019). Neural mechanisms of auditory species recognition in birds. Biological Reviews, 94(5), 1619-1635. https://doi.org/10.1111/brv.12518
Ballance, W. C., Qin, E. C., Chung, H. J., Gillette, M. L., & Kong, H. J. (2019). Reactive oxygen species-responsive drug delivery systems for the treatment of neurodegenerative diseases. Biomaterials, 217, [119292]. https://doi.org/10.1016/j.biomaterials.2019.119292
Tvedte, E. S., Walden, K. K. O., McElroy, K. E., Werren, J. H., Forbes, A. A., Hood, G. R., ... Robertson, H. M. (2019). Genome of the parasitoid wasp diachasma alloeum, an emerging model for ecological speciation and transitions to asexual reproduction. Genome biology and evolution, 11(10), 2767-2773. https://doi.org/10.1093/gbe/evz205
Sun, R., Zhang, P., Riggins, C. W., Zabaloy, M. C., Rodriguez-Zas, S. L., & Villamil, M. B. (2019). Long-term N fertilization decreased diversity and altered the composition of soil bacterial and archaeal communities. Agronomy, 9(10), [574]. https://doi.org/10.3390/agronomy9100574
Darolti, I., Wright, A. E., Sandkam, B. A., Morris, J., Bloch, N. I., Farré, M., ... Mank, J. E. (2019). Extreme heterogeneity in sex chromosome differentiation and dosage compensation in livebearers. Proceedings of the National Academy of Sciences of the United States of America, 116(38), 19031-19036. https://doi.org/10.1073/pnas.1905298116
Tseng, S. P., Wetterer, J. K., Suarez, A. V., Lee, C. Y., Yoshimura, T., Shoemaker, D. W., & Yang, C. C. S. (2019). Genetic Diversity and Wolbachia Infection Patterns in a Globally Distributed Invasive Ant. Frontiers in Genetics, 10, [838]. https://doi.org/10.3389/fgene.2019.00838
Harshman, S. W., Pitsch, R. L., Schaeublin, N. M., Smith, Z. K., Strayer, K. E., Phelps, M. S., ... Martin, J. A. (2019). Metabolomic stability of exercise-induced sweat. Journal of Chromatography B: Analytical Technologies in the Biomedical and Life Sciences, 1126-1127, [121763]. https://doi.org/10.1016/j.jchromb.2019.121763
Kramer, K., Andrade, F. C. D., Greenlee, A. J., Mendenhall, R., Bellisle, D., & Lemons Blanks, R. (2019). Periodic Earned Income Tax Credit (EITC) Payment, Financial Stress and Wellbeing: A Longitudinal Study. Journal of Family and Economic Issues, 40(3), 511-523. https://doi.org/10.1007/s10834-019-09618-2
Traniello, I. M., Chen, Z., Bagchi, V. A., & Robinson, G. E. (2019). Valence of social information is encoded in different subpopulations of mushroom body Kenyon cells in the honeybee brain. Proceedings of the Royal Society B: Biological Sciences, 286(1910), [20190901]. https://doi.org/10.1098/rspb.2019.0901
Roca, A. L. (2019). African elephant genetics: enigmas and anomalies. Journal of genetics, 98.
Abolins-Abols, M., Hanley, D., Moskát, C., Grim, T., & Hauber, M. E. (2019). Anti-parasitic egg rejection by great reed warblers (Acrocephalus arundinaceus) tracks differences along an eggshell color gradient. Behavioural Processes, 166, [103902]. https://doi.org/10.1016/j.beproc.2019.103902
Coleman, D. N., Vailati-Riboni, M., Elolimy, A. A., Cardoso, F. C., Rodriguez-Zas, S. L., Miura, M., ... Loor, J. J. (2019). Hepatic betaine-homocysteine methyltransferase and methionine synthase activity and intermediates of the methionine cycle are altered by choline supply during negative energy balance in Holstein cows. Journal of Dairy Science, 102(9), 8305-8318. https://doi.org/10.3168/jds.2018-16204
Damian, R. I., Spengler, M., Sutu, A., & Roberts, B. W. (2019). Sixteen going on sixty-six: A longitudinal study of personality stability and change across 50 years. Journal of personality and social psychology, 117(3), 674-695. https://doi.org/10.1037/pspp0000210
Shpigler, H. Y., Saul, M. C., Corona, F., Block, L., Ahmed, A. C., Zhao, S. D., & Robinson, G. E. (2019). Erratum: Deep evolutionary conservation of autism-related genes (Proceedings of the National Academy of Sciences of the United States of America (2017) 114(9653-9658) Doi: 10.1073/pnas.1708127114). Proceedings of the National Academy of Sciences of the United States of America, 116(35). https://doi.org/10.1073/pnas.1913223116
Mitrano, M., Lee, S., Husain, A. A., Delacretaz, L., Zhu, M., De La Peña Munoz, G., ... Abbamonte, P. (2019). Ultrafast time-resolved x-ray scattering reveals diffusive charge order dynamics in La2-xBaxCuO4 Science Advances, 5(8), [eaax3346]. https://doi.org/10.1126/sciadv.aax3346
Bell, A. M., Trapp, R., & Keagy, J. (2019). Correction to: Parenting behaviour is highly heritable in male stickleback (Royal Society Open Science (2018)) 5 (171029) DOI: 10.1098/rsos.171029). Royal Society Open Science, 6(8), [191372]. https://doi.org/10.1098/rsos.191372
Gadagkar, R., Gordon, D., Keller, L., Michod, R., Queller, D., Robinson, G. E., ... West-Eberhard, M. J. (2019). Insights and opportunities in insect social behavior. Current Opinion in Insect Science, 34, ix-xx. https://doi.org/10.1016/j.cois.2019.08.009
Xie, X., Hanson, C., & Sinha, S. (2019). Mechanistic interpretation of non-coding variants for discovering transcriptional regulators of drug response. BMC biology, 17(1), [62]. https://doi.org/10.1186/s12915-019-0679-8
Scharf, H. M., Stenstrom, K., Dainson, M., Benson, T. J., Fernandez-Juricic, E., & Hauber, M. E. (2019). Mimicry-dependent lateralization in the visual inspection of foreign eggs by American robins. Biology Letters, 15(7), [20190351]. https://doi.org/10.1098/rsbl.2019.0351
Shang, J., Shen, J., Liu, L., & Han, J. (2019). Constructing and mining heterogeneous information networks from massive text. In KDD 2019 - Proceedings of the 25th ACM SIGKDD International Conference on Knowledge Discovery and Data Mining (pp. 3191-3192). (Proceedings of the ACM SIGKDD International Conference on Knowledge Discovery and Data Mining). Association for Computing Machinery. https://doi.org/10.1145/3292500.3332275
Fogleman, A. J., Zahnd, W. E., Lipka, A. E., Malhi, R. S., Ganai, S., Delfino, K. R., & Jenkins, W. D. (2019). Knowledge, attitudes, and perceived barriers towards genetic testing across three rural Illinois communities. Journal of Community Genetics, 10(3), 417-423. https://doi.org/10.1007/s12687-019-00407-w
Hofmann, J. I., Schwarz, C., Rudolph, U., & Antkowiak, B. (2019). Effects of Diazepam on Low-Frequency and High- Frequency Electrocortical -Power Mediated by α1- and α2-GABAA Receptors. International journal of molecular sciences, 20(14), [3486]. https://doi.org/10.3390/ijms20143486
Roca, A. L. (2019). African elephant genetics: enigmas and anomalies †. Journal of genetics, 98(3), [83]. https://doi.org/10.1007/s12041-019-1125-y
Robinson, G. (2019). Darwinian bee-keeping: lessons from the wild. Nature, 571(7763), 34-35. https://doi.org/10.1038/d41586-019-02043-3
Hanley, D., Gern, K., Hauber, M. E., & Grim, T. (2019). Host responses to foreign eggs across the avian visual color space. American Naturalist, 194(1), 17-27. https://doi.org/10.1086/703534
Yakoub, K. M., Davies, D. J., Su, Z., Bentley, C., Forcione, M., Toman, E., ... Belli, A. (2019). Investigation into repetitive concussion in sport (RECOS): Study protocol of a prospective, exploratory, observational cohort study. BMJ Open, 9(7), [e029883]. https://doi.org/10.1136/bmjopen-2019-029883
Kostochka, A. V., Liu, X., Machado, R., & Milenkovic, O. (2019). Directed Intersection Representations and the Information Content of Digraphs. In 2019 IEEE International Symposium on Information Theory, ISIT 2019 - Proceedings (pp. 1477-1481). [8849253] (IEEE International Symposium on Information Theory - Proceedings; Vol. 2019-July). Institute of Electrical and Electronics Engineers Inc.. https://doi.org/10.1109/ISIT.2019.8849253
Gabrys, R., Dau, H., Colbourn, C. J., & Milenkovic, O. (2019). Set-Codes with Small Intersections and Small Discrepancies. In 2019 IEEE International Symposium on Information Theory, ISIT 2019 - Proceedings (pp. 2359-2363). [8849651] (IEEE International Symposium on Information Theory - Proceedings; Vol. 2019-July). Institute of Electrical and Electronics Engineers Inc.. https://doi.org/10.1109/ISIT.2019.8849651
Zhou, Y., Sinha, S., Schwartz, J. L., & Adami, G. R. (2019). A subtype of oral, laryngeal, esophageal, and lung, squamous cell carcinoma with high levels of TrkB-T1 neurotrophin receptor mRNA. BMC Cancer, 19(1), [607]. https://doi.org/10.1186/s12885-019-5789-8
Sikora, M., Pitulko, V. V., Sousa, V. C., Allentoft, M. E., Vinner, L., Rasmussen, S., ... Willerslev, E. (2019). The population history of northeastern Siberia since the Pleistocene. Nature, 570(7760), 182-188. https://doi.org/10.1038/s41586-019-1279-z
Dodd, L. D., Nowak, E., Lange, D., Parker, C. G., DeAngelis, R., Gonzalez, J. A., & Rhodes, J. S. (2019). Active feminization of the preoptic area occurs independently of the gonads in Amphiprion ocellaris. Hormones and Behavior, 112, 65-76. https://doi.org/10.1016/j.yhbeh.2019.04.002
Ujjainwala, A. L., Courtney, C. D., Wojnowski, N. M., Rhodes, J. S., & Christian, C. A. (2019). Differential impacts on multiple forms of spatial and contextual memory in diazepam binding inhibitor knockout mice. Journal of Neuroscience Research, 97(6), 683-697. https://doi.org/10.1002/jnr.24393
Rieger, S., Göllner, R., Spengler, M., Trautwein, U., Nagengast, B., Harring, J. R., & Roberts, B. W. (2019). The effects of getting a new teacher on the consistency of personality. Journal of Personality, 87(3), 485-500. https://doi.org/10.1111/jopy.12410
Rando, H. M., Wadlington, W. H., Johnson, J. L., Stutchman, J. T., Trut, L. N., Farré, M., & Kukekova, A. V. (2019). The Red Fox Y-Chromosome in Comparative Context. Genes, 10(6), [409]. https://doi.org/10.3390/genes10060409
Peng, P. C., Khoueiry, P., Girardot, C., Reddington, J. P., Garfield, D. A., Furlong, E. E. M., & Sinha, S. (2019). The role of chromatin accessibility in cis-regulatory evolution. Genome biology and evolution, 11(7), 1813-1828. [evz103]. https://doi.org/10.1093/gbe/evz103
Wang, X., Zhang, Y., Ren, X., Zhang, Y., Zitnik, M., Shang, J., ... Han, J. (2019). Cross-type biomedical named entity recognition with deep multi-task learning. Bioinformatics, 35(10), 1745-1752. https://doi.org/10.1093/bioinformatics/bty869
MacKay, J. W. B., Russell, J. C., Clout, M. N., Murphy, E. C., & Hauber, M. E. (2019). See how they run: increased ranging behavior counters potential Allee effects in experimentally introduced house mice on an island. Biological Invasions, 21(5), 1669-1681. https://doi.org/10.1007/s10530-019-01927-9
Yang, C., Mikolov, T., Hoang, D. H., & Han, J. (2019). Place deduplication with embeddings. In The Web Conference 2019 - Proceedings of the World Wide Web Conference, WWW 2019 (pp. 3420-3426). (The Web Conference 2019 - Proceedings of the World Wide Web Conference, WWW 2019). Association for Computing Machinery, Inc. https://doi.org/10.1145/3308558.3313456
Yao, S., Piao, A., Jiang, W., Zhao, Y., Shao, H., Liu, S., ... Abdelzaher, T. (2019). STFNets: Learning sensing signals from the time-frequency perspective with short-time fourier neural networks. In The Web Conference 2019 - Proceedings of the World Wide Web Conference, WWW 2019 (pp. 2192-2202). (The Web Conference 2019 - Proceedings of the World Wide Web Conference, WWW 2019). Association for Computing Machinery, Inc. https://doi.org/10.1145/3308558.3313426
Walters, K. A., Zhu, R., Welge, M., Scherler, K., Park, J. K., Rahil, Z., ... Kash, J. C. (2019). Differential effects of influenza virus NA, HA head, and HA stalk antibodies on peripheral blood leukocyte gene expression during human infection. mBio, 10(3), [e00760-19]. https://doi.org/10.1128/mBio.00760-19
Ko, Y., Kim, J., & Rodriguez-Zas, S. L. (2019). Markov chain Monte Carlo simulation of a Bayesian mixture model for gene network inference. Genes and Genomics, 41(5), 547-555. https://doi.org/10.1007/s13258-019-00789-8
Son, K., You, J. S., Yoon, M. S., Dai, C., Kim, J. H., Khanna, N., ... Chen, J. (2019). Nontranslational function of leucyl-tRNA synthetase regulates myogenic differentiation and skeletal muscle regeneration. Journal of Clinical Investigation, 129(5), 2088-2093. https://doi.org/10.1172/JCI122560
Moskát, C., & Hauber, M. E. (2019). Sex-specific responses to simulated territorial intrusions in the common cuckoo: a dual function of female acoustic signaling. Behavioral Ecology and Sociobiology, 73(5), [60]. https://doi.org/10.1007/s00265-019-2665-0
Schablitsky, J. M., Witt, K. E., Madrigal, J. R., Ellegaard, M. R., Malhi, R. S., & Schroeder, H. (2019). Ancient DNA analysis of a nineteenth century tobacco pipe from a Maryland slave quarter. Journal of Archaeological Science, 105, 11-18. https://doi.org/10.1016/j.jas.2019.02.006
Qin, E. C., Kandel, M. E., Liamas, E., Shah, T. B., Kim, C., Kaufman, C. D., ... Kong, H. J. (2019). Graphene oxide substrates with N-cadherin stimulates neuronal growth and intracellular transport. Acta Biomaterialia, 90, 412-423. https://doi.org/10.1016/j.actbio.2019.04.005
Bader, A. C., & Malhi, R. S. (2019). How Subjectivity Strengthens Research: Developing an Integrative Approach to Investigating Human Diet in the Pacific Northwest Coast. American Anthropologist, 121(2), 476-478. https://doi.org/10.1111/aman.13218
Malhi, R. S., Antón, S. C., & Fuentes, A. (2019). Increasing Diversity in Evolutionary Anthropological Sciences—the IDEAS Program. American Anthropologist, 121(2), 478-479. https://doi.org/10.1111/aman.13226
Stein, L. R., & Bell, A. M. (2019). The role of variation and plasticity in parental care during the adaptive radiation of three-spine sticklebacks. Evolution, 73(5), 1037-1044. https://doi.org/10.1111/evo.13711
Lee, J. Y., Bai, Y., Chembazhi, U. V., Peng, S., Yum, K., Luu, L. M., ... Zimmerman, S. C. (2019). Intrinsically cell-penetrating multivalent and multitargeting ligands for myotonic dystrophy type 1. Proceedings of the National Academy of Sciences of the United States of America, 116(18), 8709-8714. https://doi.org/10.1073/pnas.1820827116
Moskát, C., Bán, M., Fülöp, A., Bereczki, J., & Hauber, M. E. (2019). Bimodal habitat use in brood parasitic Common Cuckoos (Cuculus canorus) revealed by GPS telemetry. Auk, 136(2), [uky019]. https://doi.org/10.1093/auk/uky019
Talukdar, T., Zamroziewicz, M. K., Zwilling, C. E., & Barbey, A. K. (2019). Nutrient biomarkers shape individual differences in functional brain connectivity: Evidence from omega-3 PUFAs. Human Brain Mapping, 40(6), 1887-1897. https://doi.org/10.1002/hbm.24498
Wallberg, A., Bunikis, I., Pettersson, O. V., Mosbech, M. B., Childers, A. K., Evans, J. D., ... Webster, M. T. (2019). A hybrid de novo genome assembly of the honeybee, Apis mellifera, with chromosome-length scaffolds. BMC genomics, 20(1), [275]. https://doi.org/10.1186/s12864-019-5642-0
Hauber, M. E., Bond, A. L., Kouwenberg, A. L., Robertson, G. J., Hansen, E. S., Holford, M., ... Dale, J. (2019). The chemical basis of a signal of individual identity: Shell pigment concentrations track the unique appearance of Common Murre eggs. Journal of the Royal Society Interface, 16(153), [20190115]. https://doi.org/10.1098/rsif.2019.0115
Panfilio, K. A., Vargas Jentzsch, I. M., Benoit, J. B., Erezyilmaz, D., Suzuki, Y., Colella, S., ... Richards, S. (2019). Molecular evolutionary trends and feeding ecology diversification in the Hemiptera, anchored by the milkweed bug genome. Genome biology, 20(1), [64]. https://doi.org/10.1186/s13059-019-1660-0
Hanley, D., López, A. V., Fiorini, V. D., Reboreda, J. C., Grim, T., & Hauber, M. E. (2019). Variation in multicomponent recognition cues alters egg rejection decisions: A test of the optimal acceptance threshold hypothesis. Philosophical Transactions of the Royal Society B: Biological Sciences, 374(1769), [20180195]. https://doi.org/10.1098/rstb.2018.0195
Farré, M., Kim, J., Proskuryakova, A. A., Zhang, Y., Kulemzina, A. I., Li, Q., ... Larkin, D. M. (2019). Evolution of gene regulation in ruminants differs between evolutionary breakpoint regions and homologous synteny blocks. Genome Research, 29(4), 576-589. https://doi.org/10.1101/gr.239863.118
Briley, D. A., Livengood, J. M., Derringer, J. L., Tucker-Drob, E. M., Fraley, R. C., & Roberts, B. W. (2019). Interpreting Behavior Genetic Models: Seven Developmental Processes to Understand. Behavior genetics, 49(2), 196-210. https://doi.org/10.1007/s10519-018-9939-6
Thapa, S., Gates, M. K., Reuter-Carlson, U., Androwski, R. J., & Schroeder, N. E. (2019). Convergent evolution of saccate body shapes in nematodes through distinct developmental mechanisms. EvoDevo, 10(1), [5]. https://doi.org/10.1186/s13227-019-0118-5
St John, M. E., & Fuller, B. C. (2019). The effects of experimental design on mating preferences and reproductive isolation in killifish. Behavioral Ecology, 30(1), 92-100. https://doi.org/10.1093/beheco/ary150
Kim, B. M., Amores, A., Kang, S., Ahn, D. H., Kim, J. H., Kim, I. C., ... Park, H. (2019). Antarctic blackfin icefish genome reveals adaptations to extreme environments. Nature Ecology and Evolution, 3(3), 469-478. https://doi.org/10.1038/s41559-019-0812-7
Hammerslag, L. R., Belagodu, A. P., Aladesuyi Arogundade, O. A., Karountzos, A. G., Guo, Q., Galvez, R., ... Gulley, J. M. (2019). Adolescent impulsivity as a sex-dependent and subtype-dependent predictor of impulsivity, alcohol drinking and dopamine D 2 receptor expression in adult rats Addiction Biology, 24(2), 193-205. https://doi.org/10.1111/adb.12586
Bibak, K., & Milenkovic, O. (2019). Explicit formulas for the weight enumerators of some classes of deletion correcting codes. IEEE Transactions on Communications, 67(3), 1809-1816. [8573841]. https://doi.org/10.1109/TCOMM.2018.2886354
Wang, S., Huang, E., Cairns, J., Peng, J., Wang, L., & Sinha, S. (2019). Identification of pathways associated with chemosensitivity through network embedding. PLoS computational biology, 15(3), [e1006864]. https://doi.org/10.1371/journal.pcbi.1006864
Zwilling, C. E., Talukdar, T., Zamroziewicz, M. K., & Barbey, A. K. (2019). Nutrient biomarker patterns, cognitive function, and fMRI measures of network efficiency in the aging brain. NeuroImage, 188, 239-251. https://doi.org/10.1016/j.neuroimage.2018.12.007
Hu, C., Sam, R., Shan, M., Nastasa, V., Wang, M., Kim, T., ... Popescu, G. (2019). Optical excitation and detection of neuronal activity. Journal of Biophotonics, 12(3), [e201800269]. https://doi.org/10.1002/jbio.201800269
Grosz, M. P., Göllner, R., Rose, N., Spengler, M., Trautwein, U., Rauthmann, J. F., ... Roberts, B. W. (2019). The development of narcissistic admiration and Machiavellianism in early adulthood. Journal of personality and social psychology, 116(3), 467-482. https://doi.org/10.1037/pspp0000174
Hughes, K. J., Rodriguez, A., Flatt, K. M., Ray, S., Schuler, A., Rodemoyer, B., ... Vidal-Gadea, A. G. (2019). Physical exertion exacerbates decline in the musculature of an animal model of Duchenne muscular dystrophy. Proceedings of the National Academy of Sciences of the United States of America, 116(9), 3508-3517. https://doi.org/10.1073/pnas.1811379116
Sigdel, D., Kyi, V., Zhang, A., Setty, S. P., Liem, D. A., Shi, Y., ... Ping, P. (2019). Cloud-Based Phrase Mining and Analysis of User-Defined Phrase-Category Association in Biomedical Publications. Journal of visualized experiments : JoVE, (144). https://doi.org/10.3791/59108
Negi, S., Bolt, C. C., Zhang, H., & Stubbs, L. J. (2019). An extended regulatory landscape drives Tbx18 activity in a variety of prostate-associated cell lineages. Developmental Biology, 446(2), 180-192. https://doi.org/10.1016/j.ydbio.2018.11.023
Seimetz, J., Arif, W., Bangru, S., Hernaez, M., & Kalsotra, A. (2019). Cell-type specific polysome profiling from mammalian tissues. Methods, 155, 131-139. https://doi.org/10.1016/j.ymeth.2018.11.015
Masonbrink, R., Maier, T. R., Muppirala, U., Seetharam, A. S., Lord, E., Juvale, P. S., ... Baum, T. J. (2019). The genome of the soybean cyst nematode (Heterodera glycines) reveals complex patterns of duplications involved in the evolution of parasitism genes. BMC genomics, 20(1), [119]. https://doi.org/10.1186/s12864-019-5485-8
Rivera, M., Cealie, M. K., Hauber, M. E., Kleindorfer, S., & Liu, W. C. (2019). Neural activation in response to conspecific songs in zebra finch (Taeniopygia guttata) embryos and nestlings. Neuroreport, 30(3), 217-221. https://doi.org/10.1097/WNR.0000000000001187
Mailing, L. J., Allen, J. M., Pence, B. D., Rytych, J., Sun, Y., Bhattacharya, T. K., ... Woods, J. A. (2019). Behavioral response to fiber feedingis cohort-dependent and associated with gut microbiota composition in mice. Behavioural Brain Research, 359, 731-736. https://doi.org/10.1016/j.bbr.2018.09.012
Bastounes, E. R., Rando, H. M., Johnson, J. L., Trut, L. N., Sacks, B. N., Driscoll, C. A., ... Kukekova, A. V. (2019). Four structural variants associated with human-directed sociability in dogs are not found in tame red foxes (Vulpes vulpes). Animal genetics, 50(1), 116-118. https://doi.org/10.1111/age.12755
Chapman, B. P., Huang, A., Horner, E., Peters, K., Sempeles, E., Roberts, B. W., & Lapham, S. (2019). High school personality traits and 48-year all-cause mortality risk: Results from a national sample of 26 845 baby boomers. Journal of Epidemiology and Community Health, 73(2), 106-110. https://doi.org/10.1136/jech-2018-211076
Aidala, Z., Strausberger, B. M., & Hauber, M. E. (2019). Increased egg-nest visual contrast does not induce egg ejection in the eastern phoebe (Sayornis phoebe), an accepter host of the brood parasitic brown-headed cowbird (Molothrus ater). Journal of Comparative Psychology, 133(1), 46-55. https://doi.org/10.1037/com0000130
Nickel, L. B., Roberts, B. W., & Chernyshenko, O. S. (2019). No evidence of a curvilinear relation between conscientiousness and relationship, work, and health outcomes. Journal of personality and social psychology, 116(2), 296-312. https://doi.org/10.1037/pspp0000176
Zhang, Q., Duplany, A., Moncollin, V., Mouradian, S., Goillot, E., Mazelin, L., ... Gangloff, Y. G. (2019). Lack of muscle mTOR kinase activity causes early onset myopathy and compromises whole-body homeostasis. Journal of Cachexia, Sarcopenia and Muscle, 10(1), 35-53. https://doi.org/10.1002/jcsm.12336
Robertson, H. M., Robertson, E. C. N., Walden, K. K. O., Enders, L. S., & Miller, N. J. (2019). The chemoreceptors and odorant binding proteins of the soybean and pea aphids. Insect Biochemistry and Molecular Biology, 105, 69-78. https://doi.org/10.1016/j.ibmb.2019.01.005
Zhu, Q., Ren, X., Shang, J., Zhang, Y., El-Kishky, A., & Han, J. (2019). Integrating local context and global cohesiveness for open information extraction. In WSDM 2019 - Proceedings of the 12th ACM International Conference on Web Search and Data Mining (pp. 42-50). (WSDM 2019 - Proceedings of the 12th ACM International Conference on Web Search and Data Mining). Association for Computing Machinery, Inc. https://doi.org/10.1145/3289600.3291030
Li, Q., Wang, X., Zhang, Y., Ling, F., Wu, C. H., & Han, J. (2019). Pattern Discovery for Wide-Window Open Information Extraction in Biomedical Literature. In H. Schmidt, D. Griol, H. Wang, J. Baumbach, H. Zheng, Z. Callejas, X. Hu, J. Dickerson, ... L. Zhang (Eds.), Proceedings - 2018 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2018 (pp. 420-427). [8621375] (Proceedings - 2018 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2018). Institute of Electrical and Electronics Engineers Inc.. https://doi.org/10.1109/BIBM.2018.8621375
Wang, X., Zhang, Y., Li, Q., Wu, C. H., & Han, J. (2019). PENNER: Pattern-enhanced Nested Named Entity Recognition in Biomedical Literature. In H. Schmidt, D. Griol, H. Wang, J. Baumbach, H. Zheng, Z. Callejas, X. Hu, J. Dickerson, ... L. Zhang (Eds.), Proceedings - 2018 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2018 (pp. 540-547). [8621485] (Proceedings - 2018 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2018). Institute of Electrical and Electronics Engineers Inc.. https://doi.org/10.1109/BIBM.2018.8621485
Robertson, H. M. (2019). Molecular evolution of the major arthropod chemoreceptor gene families. Annual Review of Entomology, 64, 227-242. https://doi.org/10.1146/annurev-ento-020117-043322
Dron, W., Hunter, A., Sydney, A., Pal, S., Hancock, J., Scott, L., ... Horne, B. (2019). Multi-Domain Integration and Correlation Engine. In 2018 IEEE Military Communications Conference, MILCOM 2018 (pp. 1074-1079). [8599706] (Proceedings - IEEE Military Communications Conference MILCOM; Vol. 2019-October). Institute of Electrical and Electronics Engineers Inc.. https://doi.org/10.1109/MILCOM.2018.8599706
Kim, J., Frey, W. D., Sharma, K., Ghimire, S., Teruyama, R., & Stubbs, L. (2019). Allele-specific enhancer interaction at the Peg3 imprinted domain. PloS one, 14(10), [e0224287]. https://doi.org/10.1371/journal.pone.0224287
Bell, A. M., & Hellmann, J. K. (2019). An Integrative Framework for Understanding the Mechanisms and Multigenerational Consequences of Transgenerational Plasticity. Annual Review of Ecology, Evolution, and Systematics, 50, 97-118. https://doi.org/10.1146/annurev-ecolsys-110218-024613
Zhuang, H., Hanratty, T., & Han, J. (2019). Aspect-based sentiment analysis with minimal guidance. In SIAM International Conference on Data Mining, SDM 2019 (pp. 253-261). (SIAM International Conference on Data Mining, SDM 2019). Society for Industrial and Applied Mathematics Publications.
Naseri Kouzehgarani, G., Bothwell, M. Y., & Gillette, M. U. (Accepted/In press). Circadian rhythm of redox state regulates membrane excitability in hippocampal CA1 neurons. European Journal of Neuroscience. https://doi.org/10.1111/ejn.14334
Tanprasertsuk, J., Johnson, E. J., Johnson, M. A., Poon, L. W., Nelson, P. T., Davey, A., ... Scott, T. M. (2019). Clinico-Neuropathological Findings in the Oldest Old from the Georgia Centenarian Study. Journal of Alzheimer's Disease, 70(1), 35-49. https://doi.org/10.3233/JAD-181110
Kannan, K., Shook, M., Li, Y., Robinson, G. E., & Ma, J. (2019). Comparative analysis of brain and fat body gene splicing patterns in the honey bee, Apis mellifera. G3: Genes, Genomes, Genetics, 9(4), 1055-1063. https://doi.org/10.1534/g3.118.200857
Ren, X., Jiang, M., Shang, J., & Han, J. (2019). Constructing structured information networks from massive text corpora. In 26th International World Wide Web Conference 2017, WWW 2017 Companion (pp. 951-954). (26th International World Wide Web Conference 2017, WWW 2017 Companion). International World Wide Web Conferences Steering Committee. https://doi.org/10.1145/3041021.3051107
Hamilton, A. R., Traniello, I. M., Ray, A. M., Caldwell, A. S., Wickline, S. A., & Robinson, G. E. (2019). Division of labor in honey bees is associated with transcriptional regulatory plasticity in the brain. Journal of Experimental Biology, 222(14), [jeb200196]. https://doi.org/10.1242/jeb.200196
Key, M. N., Zwilling, C. E., Talukdar, T., & Barbey, A. K. (2019). Essential Amino Acids, Vitamins, and Minerals Moderate the Relationship between the Right Frontal Pole and Measures of Memory. Molecular Nutrition and Food Research, 63(15), [1801048]. https://doi.org/10.1002/mnfr.201801048
Ngumbi, E. N., Hanks, L. M., Suarez, A. V., Millar, J. G., & Berenbaum, M. R. (Accepted/In press). Factors Associated with Variation in Cuticular Hydrocarbon Profiles in the Navel Orangeworm, Amyelois transitella (Lepidoptera: Pyralidae). Journal of Chemical Ecology. https://doi.org/10.1007/s10886-019-01129-6
Li, S., Zhang, C., Lei, D., Li, J., & Han, J. (2019). GeoAttn: Localization of social media messages via attentional memory network. In SIAM International Conference on Data Mining, SDM 2019 (pp. 64-72). (SIAM International Conference on Data Mining, SDM 2019). Society for Industrial and Applied Mathematics Publications.
Roy, J., Dibaeinia, P., Fan, T. M., Sinha, S., & Das, A. (2019). Global analysis of osteosarcoma lipidomes reveal altered lipid profiles in metastatic versus nonmetastatic cells. Journal of Lipid Research, 60(2), 375-387. https://doi.org/10.1194/jlr.M088559
Hammer, R., Paul, E. J., Hillman, C. H., Kramer, A. F., Cohen, N. J., & Barbey, A. K. (2019). Individual differences in analogical reasoning revealed by multivariate task-based functional brain imaging. NeuroImage, 184, 993-1004. https://doi.org/10.1016/j.neuroimage.2018.09.011
Bell, A. M. (2019). Individual variation and the challenge hypothesis. Hormones and Behavior, [104549]. https://doi.org/10.1016/j.yhbeh.2019.06.013
Hauber, M. E., Luro, A., McCarty, C. J., Barateli, K., Cassey, P., Hansen, E. S., & Dale, J. (2019). Interannual repeatability of eggshell phenotype in individual female common Murres (Uria aalge). Canadian journal of zoology, 97(4), 385-391. https://doi.org/10.1139/cjz-2018-0172
Hanisch, P. E., Drager, K., Yang, W. H., Tubaro, P. L., & Suarez, A. V. (Accepted/In press). Intra- and interspecific variation in trophic ecology of ‘predatory’ ants in the subfamily Ponerinae. Ecological Entomology. https://doi.org/10.1111/een.12817
Kim, D., Reyes-Ordoñez, A., & Chen, J. (2019). Lentivirus-mediated RNAi in skeletal myogenesis. In Methods in Molecular Biology (pp. 95-110). (Methods in Molecular Biology; Vol. 1889). Humana Press Inc.. https://doi.org/10.1007/978-1-4939-8897-6_7
Manna, T. J., Moskát, C., Tong, L., Bán, M., Aidala, Z., Low, J., & Hauber, M. E. (Accepted/In press). Multiple Parasitism Reduces Egg Rejection in the Host (Acrocephalus arundinaceus) of a Mimetic Avian Brood Parasite (Cuculus canorus). Journal of Comparative Psychology. https://doi.org/10.1037/com0000166
Felden, A., Paris, C., Chapple, D. G., Suarez, A. V., Tsutsui, N. D., Lester, P. J., & Gruber, M. A. M. (2019). Native and introduced Argentine ant populations are characterised by distinct transcriptomic signatures associated with behaviour and immunity. NeoBiota, (49), 105-126. https://doi.org/10.3897/neobiota.49.36086
Rhodes, J. S. (2019). Neurogenetics of motivation for physical activity. In Routledge Handbook of Sport and Exercise Systems Genetics (pp. 94-106). Taylor and Francis. https://doi.org/10.4324/9781315146287-8
Dau, H., Milenkovic, O., & Puleo, G. J. (Accepted/In press). On the triangle clique cover and Kt clique cover problems. Discrete Mathematics, [111627]. https://doi.org/10.1016/j.disc.2019.111627
Gibson, J. C., Suarez, A. V., Qazi, D., Benson, T. J., Chiavacci, S. J., & Merrill, L. (2019). Prevalence and consequences of ants and other arthropods in active nests of midwestern birds. Canadian journal of zoology, 97(8), 696-704. https://doi.org/10.1139/cjz-2018-0182
Lewis, J. A., Mendenhall, R., Ojiemwen, A., Thomas, M., Riopelle, C., Harwood, S. A., & Browne Huntt, M. (2019). Racial Microaggressions and Sense of Belonging at a Historically White University. American Behavioral Scientist. https://doi.org/10.1177/0002764219859613
Golle, J., Rose, N., Göllner, R., Spengler, M., Stoll, G., Hübner, N., ... Nagengast, B. (2019). School or Work? The Choice May Change Your Personality. Psychological Science, 30(1), 32-42. https://doi.org/10.1177/0956797618806298
Nelson, T. C., Crandall, J. G., Ituarte, C. M., Catchen, J. M., & Cresko, W. A. (2019). Selection, linkage, and population structure interact to shape genetic variation among threespine stickleback genomes. Genetics, 212(4), 1367-1382. https://doi.org/10.1534/genetics.119.302261
Kendig, K. I., Baheti, S., Bockol, M. A., Drucker, T. M., Hart, S. N., Heldenbrand, J. R., ... Mainzer, L. S. (2019). SentIeon DNaSeq variant calling workflow demonstrates strong computational performance and accuracy. Frontiers in Genetics, 10(JUL), [736]. https://doi.org/10.3389/fgene.2019.00736
Xiang, D., Zhao, S. D., & Tony Cai, T. (2019). Signal classification for the integrative analysis of multiple sequences of large-scale multiple tests. Journal of the Royal Statistical Society. Series B: Statistical Methodology, 81(4), 707-734. https://doi.org/10.1111/rssb.12323
Yang, C., Liu, M., He, F., Zhang, X., Peng, J., & Han, J. (2019). Similarity modeling on heterogeneous networks via automatic path discovery. In F. Bonchi, M. Berlingerio, T. Gärtner, N. Hurley, & G. Ifrim (Eds.), Machine Learning and Knowledge Discovery in Databases - European Conference, ECML PKDD 2018, Proceedings (pp. 37-54). (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); Vol. 11052 LNAI). Springer-Verlag. https://doi.org/10.1007/978-3-030-10928-8_3
Pearish, S., Bensky, M. K., & Bell, A. M. (2019). Social environment determines the effect of boldness and activity on survival. Ethology. https://doi.org/10.1111/eth.12939
Dvoretskiy, S., Garg, K., Munroe, M., Pincu, Y., Mahmassani, Z. S., Coombs, C., ... Boppart, M. D. (2019). The impact of skeletal muscle contraction on CD146+Lin- pericytes. American Journal of Physiology - Cell Physiology, 317(5), C1011-C1024. https://doi.org/10.1152/ajpcell.00156.2019
Mu, W., Luo, J., Rieger, S., Trautwein, U., & Roberts, B. W. (2019). The relationship between self-esteem and depression when controlling for neuroticism. Collabra: Psychology, 5(1), [11]. https://doi.org/10.1525/collabra.204
Donelan, S. C., Hellmann, J. K., Bell, A. M., Luttbeg, B., Orrock, J. L., Sheriff, M. J., & Sih, A. (Accepted/In press). Transgenerational Plasticity in Human-Altered Environments. Trends in Ecology and Evolution. https://doi.org/10.1016/j.tree.2019.09.003
Wetzel, E., Grijalva, E., Robins, R. W., & Roberts, B. W. (Accepted/In press). You're Still so Vain: Changes in Narcissism From Young Adulthood to Middle Age. Journal of personality and social psychology. https://doi.org/10.1037/pspp0000266
Neumann, E., Rudolph, U., Knutson, D. E., Li, G., Cook, J. M., Hentschke, H., ... Drexler, B. (2019). Zolpidem activation of alpha 1-containing GABAA receptors selectively inhibits high frequency action potential firing of cortical neurons. Frontiers in Pharmacology, 9(JAN), [01523]. https://doi.org/10.3389/fphar.2018.01523
Saul, M. C., Blatti, C., Yang, W., Bukhari, S. A., Shpigler, H. Y., Troy, J. M., ... Sinha, S. (2019). Cross-species systems analysis of evolutionary toolkits of neurogenomic response to social challenge. Genes, Brain and Behavior, e12502. https://doi.org/10.1111/gbb.12502
Flatt, K. M., Beshers, C., Unal, C., Cohen, J. D., Sundaram, M. V., & Schroeder, N. E. (2019). Epidermal remodeling in Caenorhabditis elegans dauers requires the nidogen domain protein DEX-1. Genetics, 211(1), 169-183. https://doi.org/10.1534/genetics.118.301557
Cohen, J. D., Flatt, K. M., Schroeder, N. E., & Sundaram, M. V. (2019). Epithelial shaping by diverse apical extracellular matrices requires the nidogen domain protein DEX-1 in Caenorhabditis elegans. Genetics, 211(1), 185-200. https://doi.org/10.1534/genetics.118.301752
Shpigler, H. Y., Saul, M. C., Murdoch, E. E., Corona, F., Cash-Ahmed, A. C., Seward, C. H., ... Robinson, G. E. (2019). Honey bee neurogenomic responses to affiliative and agonistic social interactions. Genes, Brain and Behavior, 18(1), [e12509]. https://doi.org/10.1111/gbb.12509
Xin, D., El-Kishky, A., Liao, D., Norick, B., & Han, J. (2018). Active Learning on Heterogeneous Information Networks: A Multi-armed Bandit Approach. In 2018 IEEE International Conference on Data Mining, ICDM 2018 (pp. 1350-1355). [8594993] (Proceedings - IEEE International Conference on Data Mining, ICDM; Vol. 2018-November). Institute of Electrical and Electronics Engineers Inc.. https://doi.org/10.1109/ICDM.2018.00184
Tao, F., Zhang, C., Chen, X., Jiang, M., Hanratty, T., Kaplan, L., & Han, J. (2018). Doc2Cube: Allocating Documents to Text Cube Without Labeled Data. In 2018 IEEE International Conference on Data Mining, ICDM 2018 (pp. 1260-1265). [8594978] (Proceedings - IEEE International Conference on Data Mining, ICDM; Vol. 2018-November). Institute of Electrical and Electronics Engineers Inc.. https://doi.org/10.1109/ICDM.2018.00169
Zhi, S., Yang, F., Zhu, Z., Li, Q., Wang, Z., & Han, J. (2018). Dynamic Truth Discovery on Numerical Data. In 2018 IEEE International Conference on Data Mining, ICDM 2018 (pp. 817-826). [8594906] (Proceedings - IEEE International Conference on Data Mining, ICDM; Vol. 2018-November). Institute of Electrical and Electronics Engineers Inc.. https://doi.org/10.1109/ICDM.2018.00097
Yang, C., Feng, Y., Li, P., Shi, Y., & Han, J. (2018). Meta-Graph Based HIN Spectral Embedding: Methods, Analyses, and Insights. In 2018 IEEE International Conference on Data Mining, ICDM 2018 (pp. 657-666). [8594890] (Proceedings - IEEE International Conference on Data Mining, ICDM; Vol. 2018-November). Institute of Electrical and Electronics Engineers Inc.. https://doi.org/10.1109/ICDM.2018.00081
Bohn-Wippert, K., Tevonian, E. N., Lu, Y., Huang, M. Y., Megaridis, M. R., & Dar, R. D. (2018). Cell Size-Based Decision-Making of a Viral Gene Circuit. Cell Reports, 25(13), 3844-3857.e5. https://doi.org/10.1016/j.celrep.2018.12.009
Jeong, H., Moye, L. S., Southey, B. R., Hernandez, A. G., Dripps, I., Romanova, E. V., ... Rodriguez-Zas, S. L. (2018). Gene network dysregulation in the trigeminal ganglia and nucleus accumbens of a model of chronic migraine-associated hyperalgesia. Frontiers in Systems Neuroscience, 12, [63]. https://doi.org/10.3389/fnsys.2018.00063
Ravanmehr, V., Puleo, G. J., Bolouki, S., & Milenkovic, O. (2018). Paired threshold graphs. Discrete Applied Mathematics, 250, 291-308. https://doi.org/10.1016/j.dam.2018.05.008
Johnson, K. P., Dietrich, C. H., Friedrich, F., Beutel, R. G., Wipfler, B., Peters, R. S., ... Yoshizawa, K. (2018). Phylogenomics and the evolution of hemipteroid insects. Proceedings of the National Academy of Sciences of the United States of America, 115(50), 12775-12780. https://doi.org/10.1073/pnas.1815820115
Hanisch, P. E., Suarez, A. V., Tubaro, P. L., & Paris, C. I. (2018). Co-occurrence Patterns in a Subtropical Ant Community Revealed by Complementary Sampling Methodologies. Environmental entomology, 47(6), 1402-1412. https://doi.org/10.1093/ee/nvy143
Víctor Moreno-Mayar, J., Vinner, L., De Barros Damgaard, P., De La Fuente, C., Chan, J., Spence, J. P., ... Willerslev, E. (2018). Early human dispersals within the Americas. Science, 362(6419), [eaav2621]. https://doi.org/10.1126/science.aav2621
Lee, G., Sherer, N. A., Kim, N. H., Rajic, E., Kaur, D., Urriola, N., ... Kuhlman, T. E. (2018). Testing the retroelement invasion hypothesis for the emergence of the ancestral eukaryotic cell. Proceedings of the National Academy of Sciences of the United States of America, 115(49), 12465-12470. https://doi.org/10.1073/pnas.1807709115
Tabe-Bordbar, S., Emad, A., Zhao, S. D., & Sinha, S. (2018). A closer look at cross-validation for assessing the accuracy of gene regulatory networks and models. Scientific reports, 8(1), [6620]. https://doi.org/10.1038/s41598-018-24937-4
Summer internship for INdigenous peoples in Genomics (SING) Consortium (2018). A framework for enhancing ethical genomic research with Indigenous communities. Nature communications, 9(1), [2957]. https://doi.org/10.1038/s41467-018-05188-3
Schoville, S. D., Chen, Y. H., Andersson, M. N., Benoit, J. B., Bhandari, A., Bowsher, J. H., ... Richards, S. (2018). A model species for agricultural pest genomics: The genome of the Colorado potato beetle, Leptinotarsa decemlineata (Coleoptera: Chrysomelidae). Scientific reports, 8(1), [1931]. https://doi.org/10.1038/s41598-018-20154-1
Abidi, S. N. F., & Smith-Bolton, R. K. (2018). Cell fate changes induced by a Distal-less enhancer-trap transgene in the Drosophila antennal imaginal disc. Scientific reports, 8(1), [4950]. https://doi.org/10.1038/s41598-018-23093-z
Adami, G. R., Tangney, C. C., Tang, J. L., Zhou, Y., Ghaffari, S., Naqib, A., ... Schwartz, J. L. (2018). Effects of green tea on miRNA and microbiome of oral epithelium. Scientific reports, 8(1), [5873]. https://doi.org/10.1038/s41598-018-22994-3
Zhang, J., Zhang, X., Tang, H., Zhang, Q., Hua, X., Ma, X., ... Ming, R. (2018). Erratum to: Allele-defined genome of the autopolyploid sugarcane Saccharum spontaneum L. (Nature Genetics, (2018), 50, 11, (1565-1573), 10.1038/s41588-018-0237-2). Nature Genetics, 50(12). https://doi.org/10.1038/s41588-018-0293-7
Goncalves, T. M., Southey, B. R., & Rodriguez-Zas, S. L. (2018). Interplay Between Amphetamine and Activity Level in Gene Networks of the Mouse Striatum. Bioinformatics and Biology Insights, 12. https://doi.org/10.1177/1177932218815152
You, S., Tu, H., Chaney, E. J., Sun, Y., Zhao, Y., Bower, A. J., ... Boppart, S. A. (2018). Intravital imaging by simultaneous label-free autofluorescence-multiharmonic microscopy. Nature communications, 9(1), [2125]. https://doi.org/10.1038/s41467-018-04470-8
Chen, K. L. A., Liu, X., Zhao, Y. C., Hieronymi, K., Rossi, G., Auvil, L. S., ... Madak-Erdogan, Z. (2018). Long-Term Administration of Conjugated Estrogen and Bazedoxifene Decreased Murine Fecal β-Glucuronidase Activity Without Impacting Overall Microbiome Community. Scientific reports, 8(1), [8166]. https://doi.org/10.1038/s41598-018-26506-1
Katsis, A. C., Davies, M. H., Buchanan, K. L., Kleindorfer, S., Hauber, M. E., & Mariette, M. M. (2018). Prenatal exposure to incubation calls affects song learning in the zebra finch. Scientific reports, 8(1), [15232]. https://doi.org/10.1038/s41598-018-33301-5
Achury, R., & Suarez, A. (2018). Richness and Composition of Ground-dwelling Ants in Tropical Rainforest and Surrounding Landscapes in the Colombian Inter-Andean Valley. Neotropical Entomology, 47(6), 731-741. https://doi.org/10.1007/s13744-017-0565-4
Turner, B. O., Paul, E. J., Miller, M. B., & Barbey, A. K. (2018). Small sample sizes reduce the replicability of task-based fMRI studies. Communications Biology, 1(1), [62]. https://doi.org/10.1038/s42003-018-0073-z
Larabee, F. J., Smith, A. A., & Suarez, A. (2018). Snap-jaw morphology is specialized for high-speed power amplification in the Dracula ant, Mystrium camillae. Royal Society Open Science, 5(12), [181447]. https://doi.org/10.1098/rsos.181447
Kaylan, K. B., Berg, I. C., Biehl, M. J., Brougham-Cook, A., Jain, I., Jamil, S. M., ... Underhill, G. H. (2018). Spatial patterning of liver progenitor cell differentiation mediated by cellular contractility and Notch signaling. eLife, 7, [e38536]. https://doi.org/10.7554/eLife.38536
Moskát, C., Hauber, M. E., Bán, M., Fülöp, A., Geltsch, N., Marton, A., & Elek, Z. (2018). Are both notes of the common cuckoo's call necessary for familiarity recognition? Behavioural Processes, 157, 685-690. https://doi.org/10.1016/j.beproc.2018.03.017
Jones, B. M., & Robinson, G. E. (2018). Genetic accommodation and the role of ancestral plasticity in the evolution of insect eusociality. Journal of Experimental Biology, 221(23), [jeb153163]. https://doi.org/10.1242/jeb.153163
Neumann, E., Ralvenius, W. T., Acuña, M. A., Rudolph, U., & Zeilhofer, H. U. (2018). TP003 is a non-selective benzodiazepine site agonist that induces anxiolysis via α2GABAA receptors. Neuropharmacology, 143, 71-78. https://doi.org/10.1016/j.neuropharm.2018.09.026
Matthews, B. J., Dudchenko, O., Kingan, S. B., Koren, S., Antoshechkin, I., Crawford, J. E., ... Vosshall, L. B. (2018). Improved reference genome of Aedes aegypti informs arbovirus vector control. Nature, 563(7732), 501-507. https://doi.org/10.1038/s41586-018-0692-z
Armisén, D., Rajakumar, R., Friedrich, M., Benoit, J. B., Robertson, H. M., Panfilio, K. A., ... Khila, A. (2018). The genome of the water strider Gerris buenoi reveals expansions of gene repertoires associated with adaptations to life on the water. BMC genomics, 19(1). https://doi.org/10.1186/s12864-018-5163-2
Zhang, J., Zhang, X., Tang, H., Zhang, Q., Hua, X., Ma, X., ... Ming, R. (2018). Allele-defined genome of the autopolyploid sugarcane Saccharum spontaneum L. Nature Genetics, 50(11), 1565-1573. https://doi.org/10.1038/s41588-018-0237-2
Jackson, K., & Robinson, G. E. (2018). Contest experience does not increase survivorship in honey bee queen duels. Insectes Sociaux, 65(4), 631-637. https://doi.org/10.1007/s00040-018-0654-3
Göllner, R., Damian, R. I., Nagengast, B., Roberts, B. W., & Trautwein, U. (2018). It’s Not Only Who You Are but Who You Are With: High School Composition and Individuals’ Attainment Over the Life Course. Psychological Science, 29(11), 1785-1796. https://doi.org/10.1177/0956797618794454
Wang, C., Song, Y., Li, H., Zhang, M., & Han, J. (2018). Unsupervised meta-path selection for text similarity measure based on heterogeneous information networks. Data Mining and Knowledge Discovery, 32(6), 1735-1767. https://doi.org/10.1007/s10618-018-0581-y
Felden, A., Paris, C. I., Chapple, D. G., Haywood, J., Suarez, A., Tsutsui, N. D., ... Gruber, M. A. M. (2018). Behavioural variation and plasticity along an invasive ant introduction pathway. Journal of Animal Ecology, 87(6), 1653-1666. https://doi.org/10.1111/1365-2656.12886
Rodriguez-Zas, S. L., Wu, C., Southey, B. R., O'Connor, J. C., Nixon, S. E., Garcia, R., ... Dantzer, R. (2018). Disruption of microglia histone acetylation and protein pathways in mice exhibiting inflammation-associated depression-like symptoms. Psychoneuroendocrinology, 97, 47-58. https://doi.org/10.1016/j.psyneuen.2018.06.024
Dellinger, M., Zhang, W., Bell, A. M., & Hellmann, J. K. (2018). Do male sticklebacks use visual and/or olfactory cues to assess a potential mate's history with predation risk? Animal Behaviour, 145, 151-159. https://doi.org/10.1016/j.anbehav.2018.09.015
Cangellaris, O. V., Corbin, E. A., Froeter, P., Michaels, J. A., Li, X., & Gillette, M. U. (2018). Aligning Synthetic Hippocampal Neural Circuits via Self-Rolled-Up Silicon Nitride Microtube Arrays. ACS Applied Materials and Interfaces, 10(42), 35705-35714. https://doi.org/10.1021/acsami.8b10233
Yang, C., Zhang, C., Chen, X., Ye, J., & Han, J. (2018). Did You Enjoy the Ride? Understanding Passenger Experience via Heterogeneous Network Embedding. In Proceedings - IEEE 34th International Conference on Data Engineering, ICDE 2018 (pp. 1404-1413). [8509379] (Proceedings - IEEE 34th International Conference on Data Engineering, ICDE 2018). Institute of Electrical and Electronics Engineers Inc.. https://doi.org/10.1109/ICDE.2018.00158
Dowd, S. E., Mustroph, M. L., Romanova, E. V., Southey, B. R., Pinardo, H., Rhodes, J. S., & Sweedler, J. V. (2018). Exploring Exercise- and Context-Induced Peptide Changes in Mice by Quantitative Mass Spectrometry. ACS Omega, 3(10), 13817-13827. https://doi.org/10.1021/acsomega.8b01713
Yang, C., Liu, M., Zheng, V. W., & Han, J. (2018). Node, motif and subgraph: Leveraging network functional blocks through structural convolution. In A. Tagarelli, C. Reddy, & U. Brandes (Eds.), Proceedings of the 2018 IEEE/ACM International Conference on Advances in Social Networks Analysis and Mining, ASONAM 2018 (pp. 47-52). [8508729] (Proceedings of the 2018 IEEE/ACM International Conference on Advances in Social Networks Analysis and Mining, ASONAM 2018). Institute of Electrical and Electronics Engineers Inc.. https://doi.org/10.1109/ASONAM.2018.8508729
Shang, J., Shen, J., Sun, T., Liu, X., Gruenheid, A., Korn, F., ... Han, J. (2018). Investigating rumor news using agreement-aware search. In N. Paton, S. Candan, H. Wang, J. Allan, R. Agrawal, A. Labrinidis, A. Cuzzocrea, M. Zaki, D. Srivastava, A. Broder, ... A. Schuster (Eds.), CIKM 2018 - Proceedings of the 27th ACM International Conference on Information and Knowledge Management (pp. 2117-2126). (International Conference on Information and Knowledge Management, Proceedings). Association for Computing Machinery. https://doi.org/10.1145/3269206.3272020
Yuan, Q., Ren, X., He, W., Zhang, C., Geng, X., Huang, L., ... Han, J. (2018). Open-schema event profiling for massive news corpora. In N. Paton, S. Candan, H. Wang, J. Allan, R. Agrawal, A. Labrinidis, A. Cuzzocrea, M. Zaki, D. Srivastava, A. Broder, ... A. Schuster (Eds.), CIKM 2018 - Proceedings of the 27th ACM International Conference on Information and Knowledge Management (pp. 587-596). (International Conference on Information and Knowledge Management, Proceedings). Association for Computing Machinery. https://doi.org/10.1145/3269206.3271674
Meng, Y., Shen, J., Zhang, C., & Han, J. (2018). Weakly-supervised neural text classification. In N. Paton, S. Candan, H. Wang, J. Allan, R. Agrawal, A. Labrinidis, A. Cuzzocrea, M. Zaki, D. Srivastava, A. Broder, ... A. Schuster (Eds.), CIKM 2018 - Proceedings of the 27th ACM International Conference on Information and Knowledge Management (pp. 983-992). (International Conference on Information and Knowledge Management, Proceedings). Association for Computing Machinery. https://doi.org/10.1145/3269206.3271737
Mitchem, L. D., Stanis, S., Zhou, M., Loew, E., Epifanio, J. M., & Fuller, R. C. (2018). Seeing red: Color vision in the largemouth bass. Current Zoology, 65(1), 43-52. https://doi.org/10.1093/cz/zoy019
Wang, X., Pipes, L., Trut, L. N., Herbeck, Y., Vladimirova, A. V., Gulevich, R. G., ... Clark, A. G. (2018). Genomic responses to selection for tame/aggressive behaviors in the silver fox (Vulpes vulpes). Proceedings of the National Academy of Sciences of the United States of America, 115(41), 10398-10403. https://doi.org/10.1073/pnas.1800889115
Yuan, J., Hu, Z., Mahal, B. A., Zhao, S. D., Kensler, K. H., Pi, J., ... Zhang, L. (2018). Integrated Analysis of Genetic Ancestry and Genomic Alterations across Cancers. Cancer Cell, 34(4), 549-560.e9. https://doi.org/10.1016/j.ccell.2018.08.019
Neumann, E. K., Comi, T. J., Spegazzini, N., Mitchell, J. W., Rubakhin, S. S., Gillette, M. U., ... Sweedler, J. V. (2018). Multimodal Chemical Analysis of the Brain by High Mass Resolution Mass Spectrometry and Infrared Spectroscopic Imaging. Analytical chemistry, 90(19), 11572-11580. https://doi.org/10.1021/acs.analchem.8b02913
Talukdar, T., Nikolaidis, A., Zwilling, C. E., Paul, E. J., Hillman, C. H., Cohen, N. J., ... Barbey, A. K. (2018). Aerobic fitness explains individual differences in the functional brain connectome of healthy young adults. Cerebral Cortex, 28(10), 3600-3609. https://doi.org/10.1093/cercor/bhx232
Shang, J., Liu, J., Jiang, M., Ren, X., Voss, C. R., & Han, J. (2018). Automated Phrase Mining from Massive Text Corpora. IEEE Transactions on Knowledge and Data Engineering, 30(10), 1825-1837. [8306825]. https://doi.org/10.1109/TKDE.2018.2812203
Biehl, M. J., Kaylan, K. B., Thompson, R. J., Gonzalez, R. V., Weis, K. E., Underhill, G. H., & Raetzman, L. T. (2018). Cellular fate decisions in the developing female anteroventral periventricular nucleus are regulated by canonical Notch signaling. Developmental Biology, 442(1), 87-100. https://doi.org/10.1016/j.ydbio.2018.06.005
Dainson, M., Mark, M., Hossain, M., Yoo, B., Holford, M., McNeil, S. E., ... Hauber, M. E. (2018). How to Make a Mimic? Brood Parasitic Striped Cuckoo Eggs Match Host Shell Color but Not Pigment Concentrations. Journal of Chemical Ecology, 44(10), 940-946. https://doi.org/10.1007/s10886-018-0986-5
Sandroff, B. M., Motl, R. W., Reed, W. R., Barbey, A. K., Benedict, R. H. B., & DeLuca, J. (2018). Integrative CNS Plasticity With Exercise in MS: The PRIMERS (PRocessing, Integration of Multisensory Exercise-Related Stimuli) Conceptual Framework. Neurorehabilitation and Neural Repair, 32(10), 847-862. https://doi.org/10.1177/1545968318798938
Bangru, S., Arif, W., Seimetz, J., Bhate, A., Chen, J., Rashan, E. H., ... Kalsotra, A. (2018). Alternative splicing rewires Hippo signaling pathway in hepatocytes to promote liver regeneration. Nature Structural and Molecular Biology, 25(10), 928-939. https://doi.org/10.1038/s41594-018-0129-2
Kang, S., Cox, C. L., & Gulley, J. M. (2018). High frequency stimulation-induced plasticity in the prelimbic cortex of rats emerges during adolescent development and is associated with an increase in dopamine receptor function. Neuropharmacology, 141, 158-166. https://doi.org/10.1016/j.neuropharm.2018.08.037
Hays, I. R., & Hauber, M. E. (2018). How the egg rolls: A morphological analysis of avian egg shape in the context of displacement dynamics. Journal of Experimental Biology, 221(19), [jeb178988]. https://doi.org/10.1242/jeb.178988
Gibson, J. C., Larabee, F. J., Touchard, A., Orivel, J., & Suarez, A. (2018). Mandible strike kinematics of the trap-jaw ant genus Anochetus Mayr (Hymenoptera: Formicidae). Journal of Zoology, 306(2), 119-128. https://doi.org/10.1111/jzo.12580
Liem, D. A., Murali, S., Sigdel, D., Shi, Y., Wang, X., Shen, J., ... Han, J. (2018). Phrase mining of textual data to analyze extracellular matrix protein patterns across cardiovascular disease. American Journal of Physiology - Heart and Circulatory Physiology, 315(4), H910-H924. https://doi.org/10.1152/ajpheart.00175.2018
Dau, H., Duursma, I. M., Kiah, H. M., & Milenkovic, O. (2018). Repairing Reed-Solomon Codes With Multiple Erasures. IEEE Transactions on Information Theory, 64(10), 6567-6582. [8340062]. https://doi.org/10.1109/TIT.2018.2827942
Matos-Maraví, P., Matzke, N. J., Larabee, F. J., Clouse, R. M., Wheeler, W. C., Sorger, D. M., ... Janda, M. (2018). Taxon cycle predictions supported by model-based inference in Indo-Pacific trap-jaw ants (Hymenoptera: Formicidae: Odontomachus). Molecular ecology, 27(20), 4090-4107. https://doi.org/10.1111/mec.14835
Hill, P. L., & Roberts, B. W. (2018). Narcissism as a life span construct: Describing fluctuations using new approaches. In Handbook of Trait Narcissism: Key Advances, Research Methods, and Controversies (pp. 165-172). Springer International Publishing. https://doi.org/10.1007/978-3-319-92171-6_18
Li, X., Edwards, M., Swaney, K. F., Singh, N., Bhattacharya, S., Borleis, J., ... Devreotes, P. N. (2018). Mutually inhibitory Ras-PI(3,4)P 2 feedback loops mediate cell migration Proceedings of the National Academy of Sciences of the United States of America, 115(39), E9125-E9134. https://doi.org/10.1073/pnas.1809039115
Zamroziewicz, M. K., Paul, E. J., Zwilling, C. E., & Barbey, A. K. (2018). Determinants of fluid intelligence in healthy aging: Omega-3 polyunsaturated fatty acid status and frontoparietal cortex structure. Nutritional Neuroscience, 21(8), 570-579. https://doi.org/10.1080/1028415X.2017.1324357
Abolins-Abols, M., & Hauber, M. E. (2018). Host defences against avian brood parasitism: An endocrine perspective. Proceedings of the Royal Society B: Biological Sciences, 285(1886), [20180980]. https://doi.org/10.1098/rspb.2018.0980
Hankosky, E. R., Westbrook, S. R., Haake, R. M., Willing, J., Raetzman, L. T., Juraska, J. M., & Gulley, J. M. (2018). Age- and sex-dependent effects of methamphetamine on cognitive flexibility and 5-HT 2C receptor localization in the orbitofrontal cortex of Sprague-Dawley rats Behavioural Brain Research, 349, 16-24. https://doi.org/10.1016/j.bbr.2018.04.047
Harwood, S. A., Mendenhall, R., Lee, S. S., Riopelle, C., & Huntt, M. B. (2018). Everyday Racism in Integrated Spaces: Mapping the Experiences of Students of Color at a Diversifying Predominantly White Institution. Annals of the American Association of Geographers, 108(5), 1245-1259. https://doi.org/10.1080/24694452.2017.1419122
Edwards, W., & Raetzman, L. T. (2018). Complex integration of intrinsic and peripheral signaling is required for pituitary gland development. Biology of reproduction, 99(3), 504-513. https://doi.org/10.1093/biolre/ioy081
Sherrill, L. K., & Gulley, J. M. (2018). Effects of amphetamine exposure during adolescence on behavior and prelimbic cortex neuron activity in adulthood. Brain Research, 1694, 111-120. https://doi.org/10.1016/j.brainres.2018.05.028
Kukekova, A. V., Johnson, J. L., Xiang, X., Feng, S., Liu, S., Rando, H. M., ... Zhang, G. (2018). Erratum to: Red fox genome assembly identifies genomic regions associated with tame and aggressive behaviours (Nature Ecology & Evolution, (2018), 2, 9, (1479-1491), 10.1038/s41559-018-0611-6). Nature Ecology and Evolution, 2(9). https://doi.org/10.1038/s41559-018-0664-6
Kukekova, A. V., Johnson, J. L., Xiang, X., Feng, S., Liu, S., Rando, H. M., ... Zhang, G. (2018). Red fox genome assembly identifies genomic regions associated with tame and aggressive behaviours. Nature Ecology and Evolution, 2(9), 1479-1491. https://doi.org/10.1038/s41559-018-0611-6
Burke, G. R., Walden, K. K. O., Whitfield, J. B., Robertson, H. M., & Strand, M. R. (2018). Whole genome sequence of the parasitoid wasp microplitis demolitor that Harbors an endogenous virus mutualist. G3: Genes, Genomes, Genetics, 8(9), 2875-2880. https://doi.org/10.1534/g3.118.200308
Khajouei, F., & Sinha, S. (2018). An information theoretic treatment of sequence-to-expression modeling. PLoS computational biology, 14(9), [e1006459]. https://doi.org/10.1371/journal.pcbi.1006459
Hauber, M. E., Daniel, C., Stephenson, B. M., Millar, C. D., & Ismar, S. M. H. (2018). Genetic mating system of Australasian Gannets (Morus serrator). Wilson Journal of Ornithology, 130(3), 763-770. https://doi.org/10.1676/17-039.1
Moran, R. L., Zhou, M., Catchen, J. M., & Fuller, B. C. (2018). Hybridization and postzygotic isolation promote reinforcement of male mating preferences in a diverse group of fishes with traditional sex roles. Ecology and Evolution, 8(18), 9282-9294. https://doi.org/10.1002/ece3.4434
Tabatabaei Yazdi, S. M. H., Kiah, H. M., Gabrys, R., & Milenkovic, O. (2018). Mutually uncorrelated primers for DNA-based data storage. IEEE Transactions on Information Theory, 64(9), 6283-6296. [8255669]. https://doi.org/10.1109/TIT.2018.2792488
Fine, J. D., Shpigler, H. Y., Ray, A. M., Beach, N. J., Sankey, A. L., Cash-Ahmed, A., ... Robinson, G. E. (2018). Quantifying the effects of pollen nutrition on honey bee queen egg laying with a new laboratory system. PloS one, 13(9), [e0203444]. https://doi.org/10.1371/journal.pone.0203444
Wada-Katsumata, A., Robertson, H. M., Silverman, J., & Schal, C. (2018). Changes in the peripheral chemosensory system drive adaptive shifts in food preferences in insects. Frontiers in Cellular Neuroscience, 12, [281]. https://doi.org/10.3389/fncel.2018.00281
Sauer, E. L., Fuller, B. C., Richards-Zawacki, C. L., Sonn, J., Sperry, J. H., & Rohr, J. R. (2018). Variation in individual temperature preferences, not behavioural fever, affects susceptibility to chytridiomycosis in amphibians. Proceedings. Biological sciences, 285(1885). https://doi.org/10.1098/rspb.2018.1111
Löber, U., Hobbs, M., Dayaram, A., Tsangaras, K., Jones, K., Alquezar-Planas, D. E., ... Greenwood, A. D. (2018). Degradation and remobilization of endogenous retroviruses by recombination during the earliest stages of a germ-line invasion. Proceedings of the National Academy of Sciences of the United States of America, 115(34), 8609-8614. https://doi.org/10.1073/pnas.1807598115
Di Pietro, V., Porto, E., Ragusa, M., Barbagallo, C., Davies, D., Forcione, M., ... Belli, A. (2018). Salivary MicroRNAs: Diagnostic Markers of Mild Traumatic Brain Injury in Contact-Sport. Frontiers in Molecular Neuroscience, 11, [290]. https://doi.org/10.3389/fnmol.2018.00290
Moran, R. L., & Fuller, B. C. (2018). Agonistic character displacement of genetically based male colour patterns across darters. Proceedings of the Royal Society B: Biological Sciences, 285(1884), [20181248]. https://doi.org/10.1098/rspb.2018.1248
Green, D. J., Huang, R. C., Sudlow, L., Hatcher, N., Potgieter, K., McCrohan, C., ... Gillette, R. (2018). CAMP, Ca2+, pHi, and NO Regulate H-like Cation Channels That Underlie Feeding and Locomotion in the Predatory Sea Slug Pleurobranchaea californica. ACS Chemical Neuroscience, 9(8), 1986-1993. https://doi.org/10.1021/acschemneuro.8b00187
Atkins, N., Ren, S., Hatcher, N., Burgoon, P. W., Mitchell, J. W., Sweedler, J. V., & Gillette, M. L. (2018). Functional Peptidomics: Stimulus- and Time-of-Day-Specific Peptide Release in the Mammalian Circadian Clock. ACS Chemical Neuroscience, 9(8), 2001-2008. https://doi.org/10.1021/acschemneuro.8b00089
Wang, X., Zhang, Y., Li, Q., Chen, Y., & Han, J. (2018). Open Information Extraction with Meta-pattern Discovery in Biomedical Literature. In ACM-BCB 2018 - Proceedings of the 2018 ACM International Conference on Bioinformatics, Computational Biology, and Health Informatics (pp. 291-300). (ACM-BCB 2018 - Proceedings of the 2018 ACM International Conference on Bioinformatics, Computational Biology, and Health Informatics). Association for Computing Machinery, Inc. https://doi.org/10.1145/3233547.3233594
Gabrys, R., & Milenkovic, O. (2018). Unique Reconstruction of Coded Sequences from Multiset Substring Spectra. In 2018 IEEE International Symposium on Information Theory, ISIT 2018 (Vol. 2018-June, pp. 2540-2544). [8437909] Institute of Electrical and Electronics Engineers Inc.. https://doi.org/10.1109/ISIT.2018.8437909
Bibak, K., & Milenkovic, O. (2018). Weight Enumerators of Some Classes of Deletion Correcting Codes. In 2018 IEEE International Symposium on Information Theory, ISIT 2018 (Vol. 2018-June, pp. 431-435). [8437121] Institute of Electrical and Electronics Engineers Inc.. https://doi.org/10.1109/ISIT.2018.8437121
Makunin, A. I., Romanenko, S. A., Beklemisheva, V. R., Perelman, P. L., Druzhkova, A. S., Petrova, K. O., ... Trifonov, V. A. (2018). Sequencing of supernumerary chromosomes of red fox and raccoon dog confirms a non-random gene acquisition by B chromosomes. Genes, 9(8), [405]. https://doi.org/10.3390/genes9080405
Potter, B. A., Baichtal, J. F., Beaudoin, A. B., Fehren-Schmitz, L., Haynes, C. V., Holliday, V. T., ... Surovell, T. A. (2018). Current evidence allows multiple models for the peopling of the Americas. Science Advances, 4(8), [eaat5473]. https://doi.org/10.1126/sciadv.aat5473
Davis, J. P., Dumas, T. M., & Roberts, B. W. (2018). Adverse Childhood Experiences and Development in Emerging Adulthood. Emerging Adulthood, 6(4), 223-234. https://doi.org/10.1177/2167696817725608
Stein, L. R., Bukhari, S. A., & Bell, A. M. (2018). Personal and transgenerational cues are nonadditive at the phenotypic and molecular level. Nature Ecology and Evolution, 2(8), 1306-1311. https://doi.org/10.1038/s41559-018-0605-4
Lynch, K. S., Louder, M. I. M., & Hauber, M. E. (2018). Species-Specific Auditory Forebrain Responses to Non-Learned Vocalizations in Juvenile Blackbirds. Brain, behavior and evolution, 91(4), 193-200. https://doi.org/10.1159/000489115
Zhang, P., Rhodes, J. S., Garland, T., Perez, S. D., Southey, B. R., & Rodriguez-Zas, S. L. (2018). Brain region-dependent gene networks associated with selective breeding for increased voluntary wheel-running behavior. PloS one, 13(8), [e0201773]. https://doi.org/10.1371/journal.pone.0201773
Han, Z., Thapa, S., Reuter-Carlson, U., Reed, H., Gates, M., Lambert, K. N., & Schroeder, N. E. (2018). Immobility in the sedentary plant-parasitic nematode H. glycines is associated with remodeling of neuromuscular tissue. PLoS pathogens, 14(8), [e1007198]. https://doi.org/10.1371/journal.ppat.1007198
Hanson, C., Cairns, J., Wang, L., & Sinha, S. (2018). Principled multi-omic analysis reveals gene regulatory mechanisms of phenotype variation. Genome Research, 28(8), 1207-1216. https://doi.org/10.1101/gr.227066.117
Sorokina, A. M., Saul, M., Goncalves, T. M., Gogola, J. V., Majdak, P., Rodriguez-Zas, S. L., & Rhodes, J. S. (2018). Striatal transcriptome of a mouse model of ADHD reveals a pattern of synaptic remodeling. PloS one, 13(8), [e0201553]. https://doi.org/10.1371/journal.pone.0201553
Davis, J. P., Berry, D., Dumas, T. M., Ritter, E., Smith, D. C., Menard, C., & Roberts, B. W. (2018). Substance use outcomes for mindfulness based relapse prevention are partially mediated by reductions in stress: Results from a randomized trial. Journal of Substance Abuse Treatment, 91, 37-48. https://doi.org/10.1016/j.jsat.2018.05.002
Hauber, M. E., Dainson, M., Baldassarre, D. T., Hossain, M., Holford, M., & Riehl, C. (2018). The perceptual and chemical bases of egg discrimination in communally nesting greater anis Crotophaga major. Journal of Avian Biology, 49(8), [e01776]. https://doi.org/10.1111/jav.01776
Chang, C. H., Schult, J. E., Sanders, J., Liu, S. H., & Fuller, R. C. (2018). The vertical distributions and spawning site choices of red and yellow bluefin killifish Lucania goodei colour morphs. Journal of Fish Biology, 93(2), 396-400. https://doi.org/10.1111/jfb.13661
Brand, P., Robertson, H. M., Lin, W., Pothula, R., Klingeman, W. E., Jurat-Fuentes, J. L., & Johnson, B. R. (2018). The origin of the odorant receptor gene family in insects. eLife, 7, [e38340]. https://doi.org/10.7554/eLife.38340
Shi, Y., Zhu, Q., Guo, F., Zhang, C., & Han, J. (2018). Easing embedding learning by comprehensive transcription of heterogeneous information networks. In KDD 2018 - Proceedings of the 24th ACM SIGKDD International Conference on Knowledge Discovery and Data Mining (pp. 2190-2199). (Proceedings of the ACM SIGKDD International Conference on Knowledge Discovery and Data Mining). Association for Computing Machinery. https://doi.org/10.1145/3219819.3220006
Shen, J., Wu, Z., Lei, D., Zhang, C., Ren, X., Vanni, M. T., ... Han, J. (2018). HiExpan: Task-guided taxonomy construction by hierarchical tree expansion. In KDD 2018 - Proceedings of the 24th ACM SIGKDD International Conference on Knowledge Discovery and Data Mining (pp. 2180-2189). (Proceedings of the ACM SIGKDD International Conference on Knowledge Discovery and Data Mining). Association for Computing Machinery. https://doi.org/10.1145/3219819.3220115
Yang, C., Shi, X., Luo, J., & Han, J. (2018). I know you'll be back: Interpretable new user clustering and churn prediction on a mobile social application. In KDD 2018 - Proceedings of the 24th ACM SIGKDD International Conference on Knowledge Discovery and Data Mining (pp. 914-922). (Proceedings of the ACM SIGKDD International Conference on Knowledge Discovery and Data Mining). Association for Computing Machinery. https://doi.org/10.1145/3219819.3219821
Zhang, C., Tao, F., Chen, X., Shen, J., Jiang, M., Sadler, B., ... Han, J. (2018). TaxoGen: Unsupervised topic taxonomy construction by adaptive term embedding and clustering. In KDD 2018 - Proceedings of the 24th ACM SIGKDD International Conference on Knowledge Discovery and Data Mining (pp. 2701-2709). (Proceedings of the ACM SIGKDD International Conference on Knowledge Discovery and Data Mining). Association for Computing Machinery. https://doi.org/10.1145/3219819.3220064
Li, Q., Jiang, M., Zhang, X., Qu, M., Hanratty, T., Gao, J., & Han, J. (2018). TruePIE: Discovering reliable patterns in pattern-based information extraction. In KDD 2018 - Proceedings of the 24th ACM SIGKDD International Conference on Knowledge Discovery and Data Mining (pp. 1675-1684). (Proceedings of the ACM SIGKDD International Conference on Knowledge Discovery and Data Mining). Association for Computing Machinery. https://doi.org/10.1145/3219819.3220017
Shih, H. Y., Mickalide, H., Fraebel, D. T., Goldenfeld, N., & Kuehn, S. (2018). Biophysical constraints determine the selection of phenotypic fluctuations during directed evolution. Physical Biology, 15(6), [065003]. https://doi.org/10.1088/1478-3975/aac4e6
Louder, M. I. M., Hauber, M. E., & Balakrishnan, C. N. (2018). Early social experience alters transcriptomic responses to species-specific song stimuli in female songbirds. Behavioural Brain Research, 347, 69-76. https://doi.org/10.1016/j.bbr.2018.02.034
Leathlobhair, M. N., Perri, A. R., Irving-Pease, E. K., Witt, K. E., Linderholm, A., Haile, J., ... Frantz, L. A. F. (2018). The evolutionary history of dogs in the Americas. Science, 361(6397), 81-85. https://doi.org/10.1126/science.aao4776
Brandt, A. L., Green, M. L., Ishida, Y., Roca, A. L., Novakofski, J., & Mateus-Pinilla, N. E. (2018). Influence of the geographic distribution of prion protein gene sequence variation on patterns of chronic wasting disease spread in white-tailed deer (Odocoileus virginianus). Prion, 12(3-4), 204-215. https://doi.org/10.1080/19336896.2018.1474671
Rendeiro, C., & Rhodes, J. S. (2018). A new perspective of the hippocampus in the origin of exercise–brain interactions. Brain Structure and Function, 223(6), 2527-2545. https://doi.org/10.1007/s00429-018-1665-6
Rivera, M., Louder, M. I. M., Kleindorfer, S., Liu, W. C., & Hauber, M. E. (2018). Avian prenatal auditory stimulation: progress and perspectives. Behavioral Ecology and Sociobiology, 72(7), [112]. https://doi.org/10.1007/s00265-018-2528-0
Shang, J., Jiang, M., Tong, W., Xiao, J., Peng, J., & Han, J. (2018). DPPred: An Effective Prediction Framework with Concise Discriminative Patterns. IEEE Transactions on Knowledge and Data Engineering, 30(7), 1226-1239. https://doi.org/10.1109/TKDE.2017.2757476
DeThorne, L. S., & Ceman, S. (2018). Genetic testing and autism: Tutorial for communication sciences and disorders. Journal of Communication Disorders, 74, 61-73. https://doi.org/10.1016/j.jcomdis.2018.05.003
Xiao, J., Blatti, C., & Sinha, S. (2018). SigMat: A classification scheme for gene signature matching. Bioinformatics, 34(13), i547-i554. https://doi.org/10.1093/bioinformatics/bty251
Josek, T., Walden, K. K. O., Allan, B. F., Alleyne, M., & Robertson, H. M. (2018). A foreleg transcriptome for Ixodes scapularis ticks: Candidates for chemoreceptors and binding proteins that might be expressed in the sensory Haller's organ. Ticks and Tick-borne Diseases, 9(5), 1317-1327. https://doi.org/10.1016/j.ttbdis.2018.05.013
DeAngelis, R., Dodd, L., Snyder, A., & Rhodes, J. S. (2018). Dynamic regulation of brain aromatase and isotocin receptor gene expression depends on parenting status. Hormones and Behavior, 103, 62-70. https://doi.org/10.1016/j.yhbeh.2018.06.006
Robertson, H. M., Baits, R. L., Walden, K. K. O., Wada-Katsumata, A., & Schal, C. (2018). Enormous expansion of the chemosensory gene repertoire in the omnivorous German cockroach Blattella germanica. Journal of Experimental Zoology Part B: Molecular and Developmental Evolution, 330(5), 265-278. https://doi.org/10.1002/jez.b.22797
Bassham, S., Catchen, J., Lescak, E., von Hippel, F. A., & Cresko, W. A. (2018). Repeated selection of alternatively adapted haplotypes creates sweeping genomic remodeling in stickleback. Genetics, 209(3), 921-939. https://doi.org/10.1534/genetics.117.300610
Westbrook, S. R., Kang, M., Sherrill, L. K., O'Hearn, D., Krishnamani, T., & Gulley, J. M. (2018). Sex differences in adolescent ethanol drinking to behavioral intoxication. Journal of the Experimental Analysis of Behavior, 110(1), 54-62. https://doi.org/10.1002/jeab.440
Shen, J., Xiao, J., He, X., Shang, J., Sinha, S., & Han, J. (2018). Entity set search of scientific literature: An unsupervised ranking approach. In 41st International ACM SIGIR Conference on Research and Development in Information Retrieval, SIGIR 2018 (pp. 565-574). (41st International ACM SIGIR Conference on Research and Development in Information Retrieval, SIGIR 2018). Association for Computing Machinery, Inc. https://doi.org/10.1145/3209978.3210055
Brandt, J. R., De Groot, P. J. V. C., Witt, K. E., Engelbrektsson, P. K., Helgen, K. M., Malhi, R. S., ... Roca, A. L. (2018). Genetic Structure and Diversity Among Historic and Modern Populations of the Sumatran Rhinoceros (Dicerorhinus sumatrensis). Journal of Heredity, 109(5), 553-565. https://doi.org/10.1093/jhered/esy019
Karig, D., Michael Martini, K., Lu, T., DeLateur, N. A., Goldenfeld, N., & Weiss, R. (2018). Stochastic Turing patterns in a synthetic bacterial population. Proceedings of the National Academy of Sciences of the United States of America, 115(26), 6572-6577. https://doi.org/10.1073/pnas.1720770115
Mendenhall, R., Cross, K. J., Amos, J. R., Clancy, K. B. H., Imoukhuede, P. U. II., & Cromley, J. G. (2018). Intersecting identities of women in engineering. ASEE Annual Conference and Exposition, Conference Proceedings, 2018-June.
Munroe, M., Mahmassani, Z. S., Dvoretskiy, S., Reid, J. J., Miller, B. F., Hamilton, K., ... Boppart, M. (Accepted/In press). Cognitive function is preserved in aged mice following long-term β-hydroxy β-methylbutyrate supplementation. Nutritional Neuroscience, 1-13. https://doi.org/10.1080/1028415X.2018.1483101
Rando, H. M., Farré, M., Robson, M. P., Won, N. B., Johnson, J. L., Buch, R., ... Kukekova, A. V. (2018). Construction of red fox chromosomal fragments from the short-read genome assembly. Genes, 9(6), [308]. https://doi.org/10.3390/genes9060308
Masello, J. F., Martínez, J., Calderón, L., Wink, M., Quillfeldt, P., Sanz, V., ... Merino, S. (2018). Can the intake of antiparasitic secondary metabolites explain the low prevalence of hemoparasites among wild Psittaciformes? Parasites and Vectors, 11(1), [357]. https://doi.org/10.1186/s13071-018-2940-3
Hansen, M. M. K., Wen, W. Y., Ingerman, E., Razooky, B. S., Thompson, C. E., Dar, R. D., ... Weinberger, L. S. (2018). A Post-Transcriptional Feedback Mechanism for Noise Suppression and Fate Stabilization. Cell, 173(7), 1609-1621.e15. https://doi.org/10.1016/j.cell.2018.04.005
Kruepke, M., Molloy, E. K., Bresin, K., Barbey, A. K., & Verona, E. (2018). A brief assessment tool for investigating facets of moral judgment from realistic vignettes. Behavior Research Methods, 50(3), 922-936. https://doi.org/10.3758/s13428-017-0917-3
Scheib, C. L., Li, H., Desai, T., Link, V., Kendall, C., Dewar, G., ... Kivisild, T. (2018). Ancient human parallel lineages within North America contributed to a coastal expansion. Science, 360(6392), 1024-1027. https://doi.org/10.1126/science.aar6851
Kruepke, M., Molloy, E. K., Bresin, K., Barbey, A. K., & Verona, E. (2018). Erratum to: A brief assessment tool for investigating facets of moral judgment from realistic vignettes (Behavior Research Methods, (2018), 50, 3, (922-936), 10.3758/s13428-017-0917-3). Behavior Research Methods, 50(3). https://doi.org/10.3758/s13428-017-0945-z
Showmaker, K. C., Walden, K. K. O., Fields, C. J., Lambert, K. N., & Hudson, M. E. (2018). Genome sequence of the soybean cyst nematode (Heterodera glycines) endosymbiont "Candidatus Cardinium hertigii" strain cHgTN10. Genome Announcements, 6(26), [e00624-18]. https://doi.org/10.1128/genomeA.00624-18
Bengston, S. E., Dahan, R. A., Donaldson, Z., Phelps, S. M., Van Oers, K., Sih, A., & Bell, A. M. (2018). Genomic tools for behavioural ecologists to understand repeatable individual differences in behaviour. Nature Ecology and Evolution, 2(6), 944-955. https://doi.org/10.1038/s41559-017-0411-4
Grigorev, K., Kliver, S., Dobrynin, P., Komissarov, A., Wolfsberger, W., Krasheninnikova, K., ... Oleksyk, T. K. (2018). Innovative assembly strategy contributes to understanding the evolution and conservation genetics of the endangered Solenodon paradoxus from the island of Hispaniola. GigaScience, 7(6), [giy025]. https://doi.org/10.1093/gigascience/giy025
Biscarri, W., Zhao, S. D., & Brunner, R. J. (2018). A simple and fast method for computing the Poisson binomial distribution function. Computational Statistics and Data Analysis, 122, 92-100. https://doi.org/10.1016/j.csda.2018.01.007
Puleo, G. J., & Milenkovic, O. (2018). Correlation Clustering and Biclustering with Locally Bounded Errors. IEEE Transactions on Information Theory, 64(6), 4105-4119. https://doi.org/10.1109/TIT.2018.2819696
Dominguez, V. R., & Malhi, R. S. (2018). Foreword. American Anthropologist, 120(2), 328-329. https://doi.org/10.1111/aman.13041
Ujjainwala, A. L., Courtney, C. D., Rhoads, S. G., Rhodes, J. S., & Christian, C. (2018). Genetic loss of diazepam binding inhibitor in mice impairs social interest. Genes, Brain and Behavior, 17(5), [e12442]. https://doi.org/10.1111/gbb.12442
Talukdar, T., Román, F. J., Operskalski, J. T., Zwilling, C. E., & Barbey, A. K. (2018). Individual differences in decision making competence revealed by multivariate fMRI. Human Brain Mapping, 39(6), 2664-2672. https://doi.org/10.1002/hbm.24032
Bortolini, M. C., Dominguez, V. R., & Malhi, R. S. (2018). Interview with Maria Cátira Bortolini, Anthropological Geneticist. American Anthropologist, 120(2), 343-344. https://doi.org/10.1111/aman.13042
Dinets, V., Sokolovskis, K., Hanley, D., & Hauber, M. E. (2018). Striking difference in response to expanding brood parasites by birds in western and eastern Beringia. Journal of Field Ornithology, 89(2), 117-125. https://doi.org/10.1111/jofo.12247
Mallott, E. K., Garber, P. A., & Malhi, R. S. (2018). Trnl outperforms rbcl as a DNA metabarcoding marker when compared with the observed plant component of the diet of wild white-faced capuchins (cebus capucinus, primates). PloS one, 13(6), [e0199556]. https://doi.org/10.1371/journal.pone.0199556
Saltz, J. B., Bell, A. M., Flint, J., Gomulkiewicz, R., Hughes, K. A., & Keagy, J. (2018). Why does the magnitude of genotype-by-environment interaction vary? Ecology and Evolution, 8(12), 6342-6353. https://doi.org/10.1002/ece3.4128
Sharp, P. B., Sutton, B., Paul, E. J., Sherepa, N., Hillman, C. H., Cohen, N. J., ... Barbey, A. K. (2018). Mindfulness training induces structural connectome changes in insula networks. Scientific Reports, 8(1), [7929]. https://doi.org/10.1038/s41598-018-26268-w
Poynton, H. C., Hasenbein, S., Benoit, J. B., Sepulveda, M. S., Poelchau, M. F., Hughes, D. S. T., ... Richards, S. (2018). The Toxicogenome of Hyalella azteca: A Model for Sediment Ecotoxicology and Evolutionary Toxicology. Environmental Science and Technology, 52(10), 6009-6022. https://doi.org/10.1021/acs.est.8b00837
Abolins-Abols, M., & Hauber, M. E. (2018). Applying the framework and concepts of parasitology to avian brood parasitism: A comment on Avilés. Behavioral Ecology, 29(3), 520-521. https://doi.org/10.1093/beheco/arx178
Kim, I. J., Lee, J., Oh, S. J., Yoon, M. S., Jang, S. S., Holland, R. L., ... Blanke, S. R. (2018). Helicobacter pylori Infection Modulates Host Cell Metabolism through VacA-Dependent Inhibition of mTORC1. Cell Host and Microbe, 23(5), 583-593.e8. https://doi.org/10.1016/j.chom.2018.04.006
Lindo, J., Rogers, M., Mallott, E. K., Petzelt, B., Mitchell, J., Archer, D., ... DeGiorgio, M. (2018). Patterns of Genetic Coding Variation in a Native American Population before and after European Contact. American Journal of Human Genetics, 102(5), 806-815. https://doi.org/10.1016/j.ajhg.2018.03.008
Bothwell, M. Y., & Gillette, M. L. (2018). Circadian redox rhythms in the regulation of neuronal excitability. Free Radical Biology and Medicine, 119, 45-55. https://doi.org/10.1016/j.freeradbiomed.2018.01.025
Johnson, C. L., Schwarb, H., Horecka, K. M., McGarry, M. D. J., Hillman, C. H., Kramer, A. F., ... Barbey, A. K. (2018). Double dissociation of structure-function relationships in memory and fluid intelligence observed with magnetic resonance elastography. NeuroImage, 171, 99-106. https://doi.org/10.1016/j.neuroimage.2018.01.007
Akpertey, A., Singh, R. J., Diers, B. W., Graef, G. L., Mian, M. A. R., Shannon, J. G., ... Nelson, R. L. (2018). Genetic introgression from Glycine tomentella to soybean to increase seed yield. Crop Science, 58(3), 1277-1291. https://doi.org/10.2135/cropsci2017.07.0445
Swaminathan, S., Abeysekara, N. S., Knight, J. M., Liu, M., Dong, J., Hudson, M., ... Cianzio, S. R. (2018). Mapping of new quantitative trait loci for sudden death syndrome and soybean cyst nematode resistance in two soybean populations. Theoretical and Applied Genetics, 131(5), 1047-1062. https://doi.org/10.1007/s00122-018-3057-y
Ishida, Y., Gugala, N. A., Georgiadis, N. J., & Roca, A. L. (2018). Evolutionary and demographic processes shaping geographic patterns of genetic diversity in a keystone species, the African forest elephant (Loxodonta cyclotis). Ecology and Evolution, 8(10), 4919-4931. https://doi.org/10.1002/ece3.4062
Milenkovic, O., Gabrys, R., Kiah, H. M., & Yazdi, S. M. H. T. (2018). Exabytes in a Test Tube: With the right coding, DNA could archive our entire civilization. IEEE Spectrum, 55(5), 40-45. https://doi.org/10.1109/MSPEC.2018.8352574
Bardill, J., Bader, A. C., Garrison, N. A., Bolnick, D. A., Raff, J. A., Walker, A., & Malhi, R. S. (2018). Advancing the ethics of paleogenomics. Science, 360(6387), 384-385. https://doi.org/10.1126/science.aaq1131
Lewin, H. A., Robinson, G. E., Kress, W. J., Baker, W. J., Coddington, J., Crandall, K. A., ... Zhang, G. (2018). Earth BioGenome Project: Sequencing life for the future of life. Proceedings of the National Academy of Sciences of the United States of America, 115(17), 4325-4333. https://doi.org/10.1073/pnas.1720115115
Du, K., Markus, E., Fecych, M., Rhodes, J. S., & Beverly, J. L. (2018). Satiety and memory enhancing effects of a high-protein meal depend on the source of protein. Nutritional Neuroscience, 21(4), 257-267. https://doi.org/10.1080/1028415X.2016.1277055
Ren, Y., Reddy, J. S., Pottier, C., Sarangi, V., Tian, S., Sinnwell, J. P., ... Asmann, Y. W. (2018). Identification of missing variants by combining multiple analytic pipelines. BMC bioinformatics, 19(1), [139]. https://doi.org/10.1186/s12859-018-2151-0
Cangellaris, O. V., & Gillette, M. U. (2018). Biomaterials for enhancing neuronal repair. Frontiers in Materials, 5, [21]. https://doi.org/10.3389/fmats.2018.00021
Pinto-Teixeira, F., Koo, C., Rossi, A. M., Neriec, N., Bertet, C., Li, X., ... Desplan, C. (2018). Development of Concurrent Retinotopic Maps in the Fly Motion Detection Circuit. Cell, 173(2), 485-498.e11. https://doi.org/10.1016/j.cell.2018.02.053
Besel, D., Hauber, M. E., Hunter, C., Ward-Smith, T., Raubenheimer, D., Millar, C. D., & Ismar, S. M. H. (2018). Multifactorial roles of interannual variability, season, and sex for foraging patterns in a sexually size monomorphic seabird, the Australasian gannet (Morus serrator). Marine Biology, 165(4), [72]. https://doi.org/10.1007/s00227-018-3332-0
Bán, M., Moskát, C., Fülöp, A., & Hauber, M. E. (2018). Return migration of Common Cuckoos (Cuculus canorus) between breeding grounds in Hungary and wintering grounds in Africa as documented by non-PTT GPS technology. Journal of Ornithology, 159(2), 337-344. https://doi.org/10.1007/s10336-017-1508-x
Ayoub, M., Gosling, S. D., Potter, J., Shanahan, M., & Roberts, B. W. (2018). The Relations Between Parental Socioeconomic Status, Personality, and Life Outcomes. Social Psychological and Personality Science, 9(3), 338-352. https://doi.org/10.1177/1948550617707018
Westbrook, S. R., Hankosky, E. R., Dwyer, M. R., & Gulley, J. M. (2018). Age and sex differences in behavioral flexibility, sensitivity to reward value, and risky decision-making. Behavioral Neuroscience, 132(2), 75-87. https://doi.org/10.1037/bne0000235
Springer, M. S., Murphy, W. J., & Roca, A. L. (2018). Appropriate fossil calibrations and tree constraints uphold the Mesozoic divergence of solenodons from other extant mammals. Molecular Phylogenetics and Evolution, 121, 158-165. https://doi.org/10.1016/j.ympev.2018.01.007
Gabrys, R., Yaakobi, E., & Milenkovic, O. (2018). Codes in the Damerau Distance for Deletion and Adjacent Transposition Correction. IEEE Transactions on Information Theory, 64(4), 2550-2570. https://doi.org/10.1109/TIT.2017.2778143
Spengler, M., Damian, R. I., & Roberts, B. W. (2018). How you behave in school predicts life success above and beyond family background, broad traits, and cognitive ability. Journal of personality and social psychology, 114(4), 620-636. https://doi.org/10.1037/pspp0000185
Skariah, G., Perry, K. J., Drnevich, J., Henry, J. J., & Ceman, S. S. (2018). RNA helicase Mov10 is essential for gastrulation and central nervous system development. Developmental Dynamics, 247(4), 660-671. https://doi.org/10.1002/dvdy.24615
Herb, B. R., Shook, M. S., Fields, C. J., & Robinson, G. E. (2018). Defense against territorial intrusion is associated with DNA methylation changes in the honey bee brain. BMC Genomics, 19(1), [216]. https://doi.org/10.1186/s12864-018-4594-0
Davis, R. G., Park, H. M., Kim, K., Greer, J. B., Fellers, R. T., Leduc, R. D., ... Kelleher, N. L. (2018). Top-Down Proteomics Enables Comparative Analysis of Brain Proteoforms between Mouse Strains. Analytical chemistry, 90(6), 3802-3810. https://doi.org/10.1021/acs.analchem.7b04108
Branscomb, E., Biancalani, T., Goldenfeld, N., & Russell, M. (2018). Escapement mechanisms and the conversion of disequilibria; the engines of creation. Physics Reports, 677, 1-60. https://doi.org/10.1016/j.physrep.2017.02.001
Potter, B. A., Beaudoin, A. B., Haynes, C. V., Holliday, V. T., Holmes, C. E., Ives, J. W., ... Surovell, T. (2018). Arrival routes of first Americans uncertain. Science, 359(6381), 1224-1225. https://doi.org/10.1126/science.aar8233
Ravanmehr, V., Kim, M., Wang, Z., & Milenkovic, O. (2018). ChIPWig: A random access-enabling lossless and lossy compression method for ChIP-seq data. Bioinformatics, 34(6), 911-919. https://doi.org/10.1093/bioinformatics/btx685
Hekman, J. P., Johnson, J. L., Edwards, W., Vladimirova, A. V., Gulevich, R. G., Ford, A. L., ... Kukekova, A. V. (2018). Anterior pituitary transcriptome suggests differences in ACTH release in tame and aggressive foxes. G3: Genes, Genomes, Genetics, 8(3), 859-873. https://doi.org/10.1534/g3.117.300508
Jaiswal, M., Haelterman, N. A., Sandoval, H., Xiong, B., Donti, T., Kalsotra, A., ... Bellen, H. J. (2018). Erratum: Correction: Impaired Mitochondrial Energy Production Causes Light-Induced Photoreceptor Degeneration Independent of Oxidative Stress (PLoS biology (2015) 13 7 (e1002197)). PLoS biology, 16(3), e1002622. https://doi.org/10.1371/journal.pbio.1002622
Hu, R., Morley, M. P., Brandimarto, J., Tucker, N. R., Parsons, V. A., Zhao, S. D., ... Cappola, T. P. (2018). Genetic Reduction in Left Ventricular Protein Kinase C-α and Adverse Ventricular Remodeling in Human Subjects. Circulation. Genomic and precision medicine, 11(3), e001901. https://doi.org/10.1161/CIRCGEN.117.001901
Harrison, M. C., Jongepier, E., Robertson, H. M., Arning, N., Bitard-Feildel, T., Chao, H., ... Bornberg-Bauer, E. (2018). Hemimetabolous genomes reveal molecular basis of termite eusociality. Nature Ecology and Evolution, 2(3), 557-566. https://doi.org/10.1038/s41559-017-0459-1
de la Colina, M. A., Pompilio, L., Hauber, M. E., Reboreda, J. C., & Mahler, B. (2018). Parasitic egg rejection decisions of chalk-browed mockingbirds Mimus saturninus are independent of clutch composition. Animal cognition, 21(2), 301-305. https://doi.org/10.1007/s10071-018-1161-7
Hankosky, E. R., Westbrook, S. R., Haake, R. M., Marinelli, M., & Gulley, J. M. (2018). Reduced sensitivity to reinforcement in adolescent compared to adult Sprague-Dawley rats of both sexes. Psychopharmacology, 235(3), 861-871. https://doi.org/10.1007/s00213-017-4804-5
Mallott, E. K., Amato, K. R., Garber, P. A., & Malhi, R. S. (2018). Influence of fruit and invertebrate consumption on the gut microbiota of wild white-faced capuchins (Cebus capucinus). American journal of physical anthropology, 165(3), 576-588. https://doi.org/10.1002/ajpa.23395
Bensky, M. K., & Bell, A. M. (2018). Intraspecific variation in cue-specific learning in sticklebacks. Animal Behaviour, 137, 161-168. https://doi.org/10.1016/j.anbehav.2018.01.003
Huntsman, H. D., Rendeiro, C., Merritt, J. R., Pincu, Y., Cobert, A., De Lisio, M., ... Boppart, M. D. (2018). The impact of mechanically stimulated muscle-derived stromal cells on aged skeletal muscle. Experimental Gerontology, 103, 35-46. https://doi.org/10.1016/j.exger.2017.12.012
Greenwood, A. D., O'Brien, S. P., Roca, A. L., & Eiden, M. V. (2018). Transmission, evolution, and endogenization: Lessons learned from recent retroviral invasions. Microbiology and Molecular Biology Reviews, 82(1), [e00044-17]. https://doi.org/10.1128/MMBR.00044-17
Gernat, T., Rao, V. D., Middendorf, M., Dankowicz, H., Goldenfeld, N., & Robinson, G. E. (2018). Automated monitoring of behavior reveals bursty interaction patterns and rapid spreading dynamics in honeybee social networks. Proceedings of the National Academy of Sciences of the United States of America, 115(7), 1433-1438. https://doi.org/10.1073/pnas.1713568115
Fang, Y., Hill, C. M., Darcy, J., Reyes-Ordoñez, A., Arauz, E., McFadden, S., ... Bartke, A. (2018). Effects of rapamycin on growth hormone receptor knockout mice. Proceedings of the National Academy of Sciences of the United States of America, 115(7), E1495-E1503. https://doi.org/10.1073/pnas.1717065115
Qu, M., Tang, J., & Han, J. (2018). Curriculum learning for heterogeneous star network embedding via deep reinforcement learning. In WSDM 2018 - Proceedings of the 11th ACM International Conference on Web Search and Data Mining (Vol. 2018-Febuary, pp. 468-476). Association for Computing Machinery, Inc. https://doi.org/10.1145/3159652.3159711
Wu, Z., Ren, X., Xu, F. F., Li, J., & Han, J. (2018). Indirect supervision for relation extraction using question-answer pairs. In WSDM 2018 - Proceedings of the 11th ACM International Conference on Web Search and Data Mining (pp. 646-654). (WSDM 2018 - Proceedings of the 11th ACM International Conference on Web Search and Data Mining; Vol. 2018-Febuary). Association for Computing Machinery, Inc. https://doi.org/10.1145/3159652.3159709
Roberts, B. W. (2018). A Revised Sociogenomic Model of Personality Traits. Journal of Personality, 86(1), 23-35. https://doi.org/10.1111/jopy.12323
Moran, R. L., Soukup, R. M., Zhou, M., & Fuller, R. C. (2018). Egg viability decreases rapidly with time since ovulation in the rainbow darter Etheostoma caeruleum: implications for the costs of choosiness. Journal of Fish Biology, 92(2), 532-536. https://doi.org/10.1111/jfb.13523
de Flamingh, A., Roca, A. L., & van Aarde, R. J. (2018). Origin and phylogeography of African savannah elephants (Loxodonta africana) in Kruger and nearby parks in southern Africa. Conservation Genetics, 19(1), 155-167. https://doi.org/10.1007/s10592-017-1005-z
Shen, W., Han, J., Wang, J., Yuan, X., & Yang, Z. (2018). SHINE+: A General Framework for Domain-Specific Entity Linking with Heterogeneous Information Networks. IEEE Transactions on Knowledge and Data Engineering, 30(2), 353-366. [7990163]. https://doi.org/10.1109/TKDE.2017.2730862
Luro, A. B., Igic, B., Croston, R., López, A. V., Shawkey, M. D., & Hauber, M. E. (2018). Which egg features predict egg rejection responses in American robins? Replicating Rothstein's (1982) study. Ecology and Evolution, 8(3), 1673-1679. https://doi.org/10.1002/ece3.3759
Zhang, C., Lei, D., Yuan, Q., Zhuang, H., Kaplan, L., Wang, S., & Han, J. (2018). GeoBurst+: Effective and real-time local event detection in geo-tagged tweet streams. ACM Transactions on Intelligent Systems and Technology, 9(3), [34]. https://doi.org/10.1145/3066166
Mendenhall, R., Kramer, K. Z., & Bellisle, D. (2018). Low- and moderate-income families’ avenues to mobility: Overcoming threats to asset accumulation and remaining in undesirable neighborhoods. Research in Social Stratification and Mobility, 53, 26-39. https://doi.org/10.1016/j.rssm.2017.12.001
Moran, R. L., & Fuller, R. C. (2018). Male-driven reproductive and agonistic character displacement in darters and its implications for speciation in allopatry. Current Zoology, 64(1), 101-113. https://doi.org/10.1093/cz/zox069
Bergeron, Z. T., & Fuller, B. C. (2018). Using human vision to detect variation in avian coloration: How bad is it? American Naturalist, 191(2), 269-276. https://doi.org/10.1086/695282
Johnson, A. M., Chang, C. H., & Fuller, R. C. (2018). Testing the potential mechanisms for the maintenance of a genetic color polymorphism in bluefin killifish populations. Current Zoology, 64(6), 733-743. https://doi.org/10.1093/cz/zoy017
Moreno-Mayar, J. V., Potter, B. A., Vinner, L., Steinrücken, M., Rasmussen, S., Terhorst, J., ... Willerslev, E. (2018). Terminal Pleistocene Alaskan genome reveals first founding population of Native Americans. Nature, 553(7687), 203-207. https://doi.org/10.1038/nature25173
Bell, A. M., Trapp, R., & Keagy, J. (2018). Parenting behaviour is highly heritable in male stickleback. Royal Society Open Science, 5(1), [171029]. https://doi.org/10.1098/rsos.171029
Wills, B. D., Powell, S., Rivera, M. D., & Suarez, A. (2018). Correlates and Consequences of Worker Polymorphism in Ants. Annual Review of Entomology, 63, 575-598. https://doi.org/10.1146/annurev-ento-020117-043357
Rosenberger, C. L., & Chen, J. (2018). To Grow or Not to Grow: TOR and SnRK2 Coordinate Growth and Stress Response in Arabidopsis. Molecular cell, 69(1), 3-4. https://doi.org/10.1016/j.molcel.2017.12.013
de Flamingh, A., Mallott, E. K., Roca, A. L., Boraas, A. S., & Malhi, R. S. (2018). Species identification and mitochondrial genomes of ancient fish bones from the Riverine Kachemak tradition of the Kenai Peninsula, Alaska. Mitochondrial DNA Part B: Resources, 3(1), 409-411. https://doi.org/10.1080/23802359.2018.1456371
Palkopoulou, E., Lipson, M., Mallick, S., Nielsen, S., Rohland, N., Baleka, S., ... Reich, D. (2018). A comprehensive genomic history of extinct and living elephants. Proceedings of the National Academy of Sciences of the United States of America, 115(11), E2566-E2574. https://doi.org/10.1073/pnas.1720554115
Wang, S., Ma, J., Yu, M. K., Zheng, F., Huang, E. W., Han, J., ... Ideker, T. (2018). Annotating gene sets by mining large literature collections with protein networks. Pacific Symposium on Biocomputing, 0(212669), 602-613. https://doi.org/10.1142/9789813235533_0055
Fuller, R. C., & Endler, J. A. (2018). A perspective on sensory drive. Current Zoology, 64(4), 465-470. https://doi.org/10.1093/cz/zoy052
Shi, Y., Gui, H., Zhu, Q., Kaplan, L., & Han, J. (2018). ASPEM: Embedding learning by aspects in heterogeneous information networks. 144-152. Paper presented at 2018 SIAM International Conference on Data Mining, SDM 2018, San Diego, United States.
Zhu, W., Zhang, C., Yao, S., Gao, X., & Han, J. (2018). A spherical hidden Markov model for semantics-rich human mobility modeling. In 32nd AAAI Conference on Artificial Intelligence, AAAI 2018 (pp. 4613-4620). (32nd AAAI Conference on Artificial Intelligence, AAAI 2018). AAAI Press.
Southey, B. R., Romanova, E. V., Rodriguez-Zas, S. L., & Sweedler, J. V. (2018). Bioinformatics for prohormone and neuropeptide discovery. In Methods in Molecular Biology (pp. 71-96). (Methods in Molecular Biology; Vol. 1719). Humana Press Inc.. https://doi.org/10.1007/978-1-4939-7537-2_5
Manjunath, M., Zhang, Y., Kim, Y., Yeo, S. H., Sobh, O., Russell, N., ... Song, J. S. (2018). ClusterEnG: An interactive educational web resource for clustering and visualizing high-dimensional data. PeerJ Computer Science, 2018(5), [e155]. https://doi.org/10.7717/peerj-cs.155
Misra, C., Lin, F., & Kalsotra, A. (2018). Deregulation of RNA metabolism in microsatellite expansion diseases. In Advances in Neurobiology (pp. 213-238). (Advances in Neurobiology; Vol. 20). Springer New York LLC. https://doi.org/10.1007/978-3-319-89689-2_8
Eckstrum, K. S., Edwards, W., Banerjee, A., Wang, W., Flaws, J. A., Katzenellenbogen, J. A., ... Raetzman, L. T. (2018). Effects of exposure to the endocrine-Disrupting chemical bisphenol a during critical windows of murine pituitary development. Endocrinology, 159(1), 119-131. https://doi.org/10.1210/en.2017-00565
Liu, L., Shang, J., Ren, X., Xu, F. F., Gui, H., Peng, J., & Han, J. (2018). Empower sequence labeling with task-aware neural language model. In 32nd AAAI Conference on Artificial Intelligence, AAAI 2018 (pp. 5253-5260). (32nd AAAI Conference on Artificial Intelligence, AAAI 2018). AAAI Press.
Mao, Y., Ren, X., Shen, J., Gu, X., & Han, J. (2018). End-to-end reinforcement learning for automatic taxonomy induction. In ACL 2018 - 56th Annual Meeting of the Association for Computational Linguistics, Proceedings of the Conference (Long Papers) (pp. 2462-2472). (ACL 2018 - 56th Annual Meeting of the Association for Computational Linguistics, Proceedings of the Conference (Long Papers); Vol. 1). Association for Computational Linguistics (ACL).
Robertson, H. M., Waterhouse, R. M., Walden, K. K. O., Ruzzante, L., Reijnders, M. J. M. F., Coates, B. S., ... Budak, H. (2018). Genome sequence of the wheat stem sawfly, cephus cinctus, representing an early-branching lineage of the hymenoptera, illuminates evolution of hymenopteran chemoreceptors. Genome biology and evolution, 10(11), 2997-3011. https://doi.org/10.1093/gbe/evy232
Viana, J. P. G., Siqueira, M. V. B. M., Araujo, F. L., Grando, C., Sujii, P. S., De Aguiar Silvestre, E., ... Zucchi, M. I. (2018). Genomic diversity is similar between Atlantic Forest restorations and natural remnants for the native tree Casearia sylvestris Sw. PloS one, 13(3), [e0192165]. https://doi.org/10.1371/journal.pone.0192165
Dutta, D., Lai, K. Y., Reyes-Ordoñez, A., Chen, J., & van der Donk, W. A. (2018). Lanthionine synthetase C-like protein 2 (LanCL2) is important for adipogenic differentiation. Journal of Lipid Research, 59(8), 1433-1445. https://doi.org/10.1194/jlr.M085274
Dau, H., & Milenkovic, O. (2018). Maxminsum steiner systems for access balancing in distributed storage. SIAM Journal on Discrete Mathematics, 32(3), 1644-1671. https://doi.org/10.1137/17M1143964
Peng, J., Milenkovic, O., & Ochoa, I. (2018). METHCOMP: A special purpose compression platform for DNA methylation data. Bioinformatics, 34(15), 2654-2656. https://doi.org/10.1093/bioinformatics/bty143
Rong, Y., Zhao, S. D., Zhu, J., Yuan, W., Cheng, W., & Li, Y. (2018). More accurate semiparametric regression in pharmacogenomics. Statistics and its Interface, 11(4), 573-580. https://doi.org/10.4310/SII.2018.v11.n4.a2
Daugherty, A. M., Zwilling, C., Paul, E. J., Sherepa, N., Allen, C., Kramer, A. F., ... Barbey, A. K. (2018). Multi-modal fitness and cognitive training to enhance fluid intelligence. Intelligence, 66, 32-43. https://doi.org/10.1016/j.intell.2017.11.001
Nikolaidis, A., & Barbey, A. K. (2018). Network dynamics theory of human intelligence. In The Cambridge Handbook of the Neuroscience of Creativity (pp. 382-404). Cambridge University Press. https://doi.org/10.1017/9781316556238.022
Bui, H. X., & Schroeder, N. E. (2018). Postembryonic ventral nerve cord development and gonad migration in steinernema carpocapsae. Journal of Nematology, 50(1), 27-32. https://doi.org/10.21307/jofnem-2018-005
Smith, A. A., Suarez, A., & Liebig, J. (2018). Queen pheromones out of context: A comment on Holman. Behavioral Ecology, 29(6). https://doi.org/10.1093/beheco/ary065
Zhang, C., Liu, M., Liu, Z., Yang, C., Zhang, L., & Han, J. (2018). Spatiotemporal activity modeling under data scarcity: A graph-regularized cross-modal embedding approach. In 32nd AAAI Conference on Artificial Intelligence, AAAI 2018 (pp. 531-538). (32nd AAAI Conference on Artificial Intelligence, AAAI 2018). AAAI Press.
Li, P., & Milenkovic, O. (2018). Submodular hypergraphs: P-Laplacians, cheeger inequalities and spectral clustering. In J. Dy, & A. Krause (Eds.), 35th International Conference on Machine Learning, ICML 2018 (pp. 4690-4719). (35th International Conference on Machine Learning, ICML 2018; Vol. 7). International Machine Learning Society (IMLS).
Kleindorfer, S., Hauber, M. E., & Colombelli-Négrel, DI. (2018). Teaching behavior is responsive and costly in fairy-wrens though the time course needs to be defined. Behavioral Ecology, 29(1), e3-e4. https://doi.org/10.1093/beheco/arx132
Meng, Y., Huang, J., Shang, J., & Han, J. (2018). TextCube: Automated construction and multidimensional exploration. Proceedings of the VLDB Endowment, 12(12), 1974-1977. https://doi.org/10.14778/3352063.3352113
Mendenhall, R. (2018). The medicalization of poverty in the lives of low-income black mothers and children. Journal of Law, Medicine and Ethics, 46(3), 644-650. https://doi.org/10.1177/1073110518804218
Mitchem, L. D., Stanis, S., Sutton, N. M., Turner, Z., & Fuller, R. C. (2018). The pervasive effects of lighting environments on sensory drive in bluefin killifish: An investigation into male/male competition, female choice, and predation. Current Zoology, 64(4), 499-512. https://doi.org/10.1093/cz/zoy038
Kent, M., & Bell, A. M. (2018). Changes in behavior and brain immediate early gene expression in male threespined sticklebacks as they become fathers. Hormones and Behavior, 97, 102-111. https://doi.org/10.1016/j.yhbeh.2017.11.002
Donaldson, M. E., Rico, Y., Hueffer, K., Rando, H. M., Kukekova, A. V., & Kyle, C. J. (2018). Development of a genotype-by-sequencing immunogenetic assay as exemplified by screening for variation in red fox with and without endemic rabies exposure. Ecology and Evolution, 8(1), 572-583. https://doi.org/10.1002/ece3.3583
Cianzio, S. R., Arelli, P. R., Swaminathan, S., Lundeen, P., Gebhart, G., Rivera-Velez, N., ... Hudson, M. (2018). Genetically diverse soybean cyst nematode-resistant full-sib soybean germplasm lines AR4SCN, AR5SCN, AR6SCN, AR7SCN, and AR8SCN. Journal of Plant Registrations, 12(1), 124-131. https://doi.org/10.3198/jpr2017.03.0015crg
Kopp, M., Servedio, M. R., Mendelson, T. C., Safran, R. J., Rodríguez, R. L., Hauber, M. E., ... Van Doorn, G. S. (2018). Mechanisms of assortative mating in speciation with gene flow: Connecting theory and empirical research. American Naturalist, 191(1), 1-20. https://doi.org/10.1086/694889
Antón, S. C., Malhi, R. S., & Fuentes, A. (2018). Race and diversity in U.S. Biological Anthropology: A decade of AAPA initiatives. American journal of physical anthropology, 165, 158-180. https://doi.org/10.1002/ajpa.23382
Jiang, W., Miao, C., Su, L., Li, Q., Hu, S., Wang, S., ... Kaplan, L. (2018). Towards quality aware information integration in distributed sensing systems. IEEE Transactions on Parallel and Distributed Systems, 29(1), 198-211. https://doi.org/10.1109/TPDS.2017.2712630