Genomics data analysis short course
The IGB Computational Genomics, in collaboration with HPCBio, will be piloting a four-session short course in genomics data analysis. The goal is to provide a conceptual framework for how to learn bioinformatics. This framework will be illustrated with bulk and single-cell RNA-seq analyses using the R programming language. The course will assume knowledge at the level of the HPCBio workshops. Email cg@igb.illinois.edu to attend.
The course will meet on the following Mondays from 12:00 - 1:00 pm CT. Preliminary syllabus:
|
Date |
Location |
Description |
|
2/6/2023 |
IGB 607 |
Topics: Concepts and framework of bioinformatics, formulating data analyses Exercises: Identify literature examples of genomic analyses, apply framework to examples |
|
3/6/2023 |
Topics: Discussion of literature examples, canonical data analysis strategies Exercises: Individually formulate analysis questions of interest, obtain and preprocess relevant data |
|
|
4/3/2023 |
IGB 607 |
Topics: R and R workflow, single-cell RNA-seq Exercises: Single-cell RNA-seq tutorial |
|
5/1/2023 |
IGB 607 |
Topics: Guided analyses of individually formulated questions Exercises: Publish paper |
