December 11th 2024

Description: The Core Facilities at the Carl R. Woese Institute for Genomic Biology will be hosting a educational workshop aimed at improving familiarity with ImageJ and FIJI software, commonly used in the analysis of microscope images.

The Zoom recording for the workshop can be found here.

Files for the demos can be found here.

FIJI can be found here.

Workshop: Agenda

Workshop will be held at IGB 607 from 9am - 12pm.

Wednesday, December 11th
9:00- 9:30 am	Introduction to Microscopy Learn how the physical features of your sample and microscope will impact data collection.	Dr. Glenn Fried
9:30- 10:00 am	Introduction to Image Analysis Learn about thresholding, filters, image statistics, image histograms, and image analysis workflows.	Dr. Austin Cyphersmith
10:00- 10:20am	Coffee Break
10:20- 10:50 am	Introduction to FIJI Overview of basic FIJI workflows and macros	Dr. Umnia Doha
10:50- 11:20am	Segmentation Demonstration	Dr. Duncan Nall
11:20am- 11:50am	Colocalization Demonstration	Dr. Austin Cyphersmith